Variant report

Variant rs56073544
Chromosome Location chr22:23625886-23625887
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23595000-23647000 Strong transcription Dnd41 blood
2 chr22:23595800-23649600 Strong transcription Primary neutrophils fromperipheralblood blood
3 chr22:23599400-23635000 Weak transcription Small Intestine intestine
4 chr22:23600200-23632000 Strong transcription Fetal Intestine Small intestine
5 chr22:23601800-23641000 Strong transcription Primary T cells from cord blood blood
6 chr22:23603400-23631600 Strong transcription Fetal Intestine Large intestine
7 chr22:23608800-23649400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
8 chr22:23612600-23647800 Strong transcription iPS-20b Cell Line embryonic stem cell
9 chr22:23613000-23629600 Strong transcription HUES64 Cell Line embryonic stem cell
10 chr22:23613000-23640800 Strong transcription iPS-18 Cell Line embryonic stem cell
11 chr22:23616600-23639000 Weak transcription Fetal Kidney kidney
12 chr22:23616800-23637200 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr22:23618200-23628600 Weak transcription Fetal Lung lung
14 chr22:23619400-23626600 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr22:23620000-23626400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr22:23620400-23626600 Weak transcription Placenta Amnion Placenta Amnion
17 chr22:23621600-23626600 Weak transcription Aorta Aorta
18 chr22:23621800-23626200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr22:23622000-23627200 Weak transcription Left Ventricle heart
20 chr22:23623000-23626400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr22:23623400-23626200 Enhancers Brain Hippocampus Middle brain
22 chr22:23623400-23626400 Genic enhancers Spleen Spleen
23 chr22:23623400-23627200 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
24 chr22:23623400-23631800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr22:23623600-23626200 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
26 chr22:23623600-23627200 Enhancers Brain Substantia Nigra brain
27 chr22:23623600-23630400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr22:23624000-23647000 Strong transcription HUES48 Cell Line embryonic stem cell
29 chr22:23624000-23649200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr22:23624200-23632000 Strong transcription K562 blood
31 chr22:23624200-23640000 Strong transcription iPS-15b Cell Line embryonic stem cell
32 chr22:23624200-23644600 Strong transcription Lung lung
33 chr22:23624200-23647000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr22:23624200-23647200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr22:23624400-23626200 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr22:23624400-23627200 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr22:23624400-23636200 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr22:23624400-23640800 Strong transcription H9 Cell Line embryonic stem cell
39 chr22:23624400-23649400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr22:23624400-23649400 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr22:23624400-23649400 Strong transcription Thymus Thymus
42 chr22:23624400-23649600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr22:23624400-23649600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr22:23624600-23626200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr22:23624600-23626200 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr22:23624600-23626400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr22:23624600-23626800 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr22:23624600-23627800 Genic enhancers Stomach Smooth Muscle stomach
49 chr22:23624600-23629000 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr22:23624600-23629200 Weak transcription Skeletal Muscle Female skeletal muscle

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