The 2.0 version of rSNPBase

Variant report

Variant rs560786102
Chromosome Location chr9:97590907-97590908
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:97563600-97594400 Weak transcription Primary T helper cells PMA-I stimulated --
2 chr9:97567400-97593400 Weak transcription Thymus Thymus
3 chr9:97570000-97594400 Weak transcription Dnd41 blood
4 chr9:97570000-97601400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr9:97571800-97622600 Weak transcription Primary B cells from cord blood blood
6 chr9:97572000-97601600 Weak transcription Primary T cells fromperipheralblood blood
7 chr9:97572600-97593600 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr9:97580600-97600200 Weak transcription Primary hematopoietic stem cells blood
9 chr9:97581800-97591800 Weak transcription Small Intestine intestine
10 chr9:97581800-97609600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr9:97582000-97599400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr9:97582200-97594000 Weak transcription NHEK skin
13 chr9:97584200-97593800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr9:97584800-97591600 Weak transcription GM12878-XiMat blood
15 chr9:97585000-97609600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr9:97586000-97591600 Weak transcription Hela-S3 cervix
17 chr9:97588000-97591600 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr9:97588000-97591600 Weak transcription Fetal Stomach stomach
19 chr9:97588800-97591600 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr9:97589000-97591000 Enhancers Liver Liver
21 chr9:97589000-97591000 Enhancers Osteobl bone
22 chr9:97589200-97591000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr9:97589200-97591000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr9:97589200-97591000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr9:97589200-97591000 Enhancers Fetal Lung lung
26 chr9:97589200-97591800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr9:97589200-97591800 Weak transcription Fetal Muscle Trunk muscle
28 chr9:97589200-97591800 Weak transcription Left Ventricle heart
29 chr9:97589200-97592400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr9:97589200-97598800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr9:97589200-97600400 Weak transcription Primary T cells from cord blood blood
32 chr9:97589200-97602000 Weak transcription Lung lung
33 chr9:97589200-97605400 Weak transcription Spleen Spleen
34 chr9:97589200-97609400 Weak transcription Pancreas Pancrea
35 chr9:97589200-97622400 Weak transcription Aorta Aorta
36 chr9:97589400-97591000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr9:97589400-97591200 Weak transcription Esophagus oesophagus
38 chr9:97589400-97591800 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr9:97589400-97591800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr9:97589400-97598600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr9:97589600-97591000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr9:97589600-97591200 Weak transcription Placenta Placenta
43 chr9:97589600-97592200 Enhancers HSMM muscle
44 chr9:97589600-97592200 Enhancers HSMMtube muscle
45 chr9:97590000-97596600 Weak transcription Fetal Heart heart
46 chr9:97590200-97591600 Weak transcription Brain Angular Gyrus brain
47 chr9:97590200-97591800 Weak transcription Fetal Muscle Leg muscle
48 chr9:97590200-97592000 Weak transcription Colonic Mucosa Colon
49 chr9:97590200-97596800 Weak transcription Fetal Intestine Small intestine
50 chr9:97590400-97591000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015