Variant report

Variant rs56080716
Chromosome Location chr6:5219910-5219911
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5176200-5239600 Weak transcription Thymus Thymus
2 chr6:5194000-5220800 Weak transcription GM12878-XiMat blood
3 chr6:5205600-5220000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr6:5205600-5223000 Weak transcription Right Atrium heart
5 chr6:5206200-5246800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr6:5206600-5240800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr6:5206800-5221000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr6:5206800-5232400 Weak transcription Psoas Muscle Psoas
9 chr6:5207000-5231000 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr6:5208200-5259800 Weak transcription Primary B cells from peripheral blood blood
11 chr6:5208400-5231400 Weak transcription Brain Anterior Caudate brain
12 chr6:5208400-5239800 Weak transcription Liver Liver
13 chr6:5208800-5231000 Weak transcription Brain Angular Gyrus brain
14 chr6:5210000-5230400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr6:5212600-5230800 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr6:5214200-5223600 Weak transcription Fetal Brain Male brain
17 chr6:5214200-5231600 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr6:5214400-5220400 Weak transcription H1 Cell Line embryonic stem cell
19 chr6:5214400-5223800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr6:5214600-5223600 Weak transcription NH-A brain
21 chr6:5214600-5241000 Weak transcription Brain Germinal Matrix brain
22 chr6:5214600-5248800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr6:5214800-5222800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr6:5214800-5231600 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr6:5214800-5248800 Weak transcription A549 lung
26 chr6:5215000-5220600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr6:5215000-5241400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr6:5215000-5244800 Weak transcription Gastric stomach
29 chr6:5215000-5252600 Weak transcription Stomach Smooth Muscle stomach
30 chr6:5215000-5257400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr6:5215000-5259800 Weak transcription Primary T cells fromperipheralblood blood
32 chr6:5215200-5224800 Weak transcription Fetal Thymus thymus
33 chr6:5215200-5227400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr6:5215200-5239400 Weak transcription Aorta Aorta
35 chr6:5215200-5239400 Weak transcription Fetal Muscle Leg muscle
36 chr6:5215200-5239800 Weak transcription Esophagus oesophagus
37 chr6:5215200-5239800 Weak transcription Lung lung
38 chr6:5215200-5244800 Weak transcription Left Ventricle heart
39 chr6:5215200-5244800 Weak transcription Right Ventricle heart
40 chr6:5215400-5220000 Weak transcription Brain Inferior Temporal Lobe brain
41 chr6:5215400-5222000 Weak transcription Dnd41 blood
42 chr6:5215400-5239600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr6:5215400-5259800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr6:5215600-5221800 Weak transcription Primary B cells from cord blood blood
45 chr6:5215600-5223200 Weak transcription Fetal Heart heart
46 chr6:5215600-5229600 Weak transcription Muscle Satellite Cultured Cells --
47 chr6:5215600-5230400 Weak transcription HSMM muscle
48 chr6:5215600-5251600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr6:5215600-5254600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr6:5215600-5259800 Weak transcription NHDF-Ad bronchial

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