Variant report

Variant	rs560832080
Chromosome Location	chr9:103999737-103999738
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831671	chr9:103858107-104020816	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3378820	chr9:103999106-104001679	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3372627	chr9:103999156-104002004	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3355579	chr9:103999631-104001229	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv2286813	chr9:103999738-103999740	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:103997800-104000800	Weak transcription	Brain Anterior Caudate	brain
2	chr9:103998000-104016800	Weak transcription	HepG2	liver
3	chr9:103998200-104000800	Weak transcription	Brain Substantia Nigra	brain
4	chr9:103998200-104006000	Weak transcription	Brain Angular Gyrus	brain
5	chr9:103998800-103999800	Enhancers	Brain Hippocampus Middle	brain
6	chr9:103998800-104004400	Weak transcription	Brain Cingulate Gyrus	brain
7	chr9:103999400-103999800	Enhancers	Brain Inferior Temporal Lobe	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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