Variant report

Variant rs560842242
Chromosome Location chr10:22609282-22609283
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22605400-22609400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr10:22605800-22610000 Weak transcription Spleen Spleen
3 chr10:22606400-22609400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
4 chr10:22608600-22609400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
5 chr10:22608600-22609400 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
6 chr10:22608600-22609400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr10:22608600-22609400 Bivalent Enhancer Fetal Thymus thymus
8 chr10:22608600-22609400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
9 chr10:22608800-22609400 Flanking Active TSS Primary B cells from cord blood blood
10 chr10:22608800-22609400 Flanking Active TSS Primary T cells from cord blood blood
11 chr10:22608800-22609400 Flanking Active TSS Primary hematopoietic stem cells blood
12 chr10:22608800-22609400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
13 chr10:22608800-22609400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
14 chr10:22608800-22609400 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
15 chr10:22608800-22609400 Flanking Active TSS Muscle Satellite Cultured Cells --
16 chr10:22608800-22609400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr10:22608800-22609400 Flanking Active TSS Liver Liver
18 chr10:22608800-22609400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
19 chr10:22608800-22609400 Active TSS Brain Substantia Nigra brain
20 chr10:22608800-22609400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
21 chr10:22608800-22609400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
22 chr10:22608800-22609400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
23 chr10:22608800-22609400 Enhancers Stomach Mucosa stomach
24 chr10:22608800-22609400 Flanking Active TSS HepG2 liver
25 chr10:22608800-22609400 Flanking Active TSS Osteobl bone
26 chr10:22608800-22610000 Active TSS Right Atrium heart
27 chr10:22608800-22610200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
28 chr10:22608800-22611000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr10:22608800-22611000 Active TSS Brain Hippocampus Middle brain
30 chr10:22608800-22611000 Bivalent/Poised TSS Thymus Thymus
31 chr10:22608800-22611400 Bivalent/Poised TSS Brain Germinal Matrix brain
32 chr10:22608800-22611800 Active TSS HSMMtube muscle
33 chr10:22608800-22612400 Active TSS Psoas Muscle Psoas
34 chr10:22609000-22609400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
35 chr10:22609000-22609400 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
36 chr10:22609000-22609400 Flanking Bivalent TSS/Enh hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr10:22609000-22609400 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
38 chr10:22609000-22609400 Flanking Active TSS Primary monocytes fromperipheralblood blood
39 chr10:22609000-22609400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
40 chr10:22609000-22609400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
41 chr10:22609000-22609400 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
42 chr10:22609000-22609400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
43 chr10:22609000-22609400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
44 chr10:22609000-22609400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
45 chr10:22609000-22609400 Active TSS Brain Angular Gyrus brain
46 chr10:22609000-22609400 Flanking Active TSS Brain Anterior Caudate brain
47 chr10:22609000-22609400 Active TSS Brain Cingulate Gyrus brain
48 chr10:22609000-22609400 Flanking Active TSS Duodenum Mucosa Duodenum
49 chr10:22609000-22609400 Flanking Active TSS Fetal Brain Male brain
50 chr10:22609000-22609400 Flanking Active TSS Fetal Brain Female brain

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