The 2.0 version of rSNPBase

Variant report

Variant rs56084677
Chromosome Location chr12:121132459-121132460
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121127600-121132600 Weak transcription Fetal Brain Male brain
2 chr12:121127600-121147600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr12:121127800-121135000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr12:121128600-121132600 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr12:121129200-121132600 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr12:121130200-121143000 Strong transcription Dnd41 blood
7 chr12:121130200-121143400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr12:121130400-121135800 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr12:121130400-121136200 Strong transcription Primary B cells from peripheral blood blood
10 chr12:121130400-121136400 Strong transcription Primary B cells from cord blood blood
11 chr12:121130600-121133000 Genic enhancers Skeletal Muscle Female skeletal muscle
12 chr12:121130600-121136000 Genic enhancers Fetal Intestine Large intestine
13 chr12:121130600-121136000 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr12:121130600-121141800 Strong transcription NHEK skin
15 chr12:121130600-121142000 Strong transcription Fetal Stomach stomach
16 chr12:121130600-121142400 Strong transcription GM12878-XiMat blood
17 chr12:121130600-121143200 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr12:121130800-121135600 Strong transcription Spleen Spleen
19 chr12:121130800-121136000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr12:121130800-121136000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr12:121130800-121140000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
22 chr12:121130800-121140400 Strong transcription Primary T helper cells fromperipheralblood blood
23 chr12:121130800-121141600 Strong transcription Fetal Muscle Trunk muscle
24 chr12:121130800-121141800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr12:121130800-121141800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr12:121130800-121141800 Strong transcription Thymus Thymus
27 chr12:121130800-121142000 Strong transcription Osteobl bone
28 chr12:121130800-121142200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr12:121130800-121143600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr12:121131000-121133000 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr12:121131000-121134200 Genic enhancers Rectal Mucosa Donor 29 rectum
32 chr12:121131000-121135600 Strong transcription Aorta Aorta
33 chr12:121131000-121139800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr12:121131000-121141200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr12:121131000-121141600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr12:121131000-121142400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr12:121131200-121132800 Weak transcription Psoas Muscle Psoas
38 chr12:121131200-121134200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr12:121131200-121135000 Weak transcription Right Atrium heart
40 chr12:121131200-121136000 Strong transcription Primary monocytes fromperipheralblood blood
41 chr12:121131200-121136200 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr12:121131200-121136200 Strong transcription Fetal Muscle Leg muscle
43 chr12:121131200-121137400 Strong transcription Gastric stomach
44 chr12:121131200-121141400 Strong transcription Primary T helper naive cells fromperipheralblood blood
45 chr12:121131200-121141800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr12:121131200-121141800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr12:121131200-121142000 Strong transcription Primary T cells fromperipheralblood blood
48 chr12:121131200-121143800 Strong transcription Fetal Thymus thymus
49 chr12:121131400-121132800 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
50 chr12:121131400-121133400 Strong transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015