Variant report

Variant rs56095772
Chromosome Location chr4:57204073-57204074
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57167800-57218600 Weak transcription Small Intestine intestine
2 chr4:57177600-57215400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr4:57178200-57211800 Weak transcription Brain Hippocampus Middle brain
4 chr4:57184600-57211200 Weak transcription Brain Cingulate Gyrus brain
5 chr4:57190400-57214400 Weak transcription Brain Anterior Caudate brain
6 chr4:57190600-57214600 Weak transcription Brain Substantia Nigra brain
7 chr4:57190600-57252400 Weak transcription Colonic Mucosa Colon
8 chr4:57193600-57213000 Weak transcription Left Ventricle heart
9 chr4:57195000-57214400 Weak transcription Placenta Placenta
10 chr4:57195200-57238000 Weak transcription HUVEC blood vessel
11 chr4:57196000-57204600 Weak transcription HSMM muscle
12 chr4:57196000-57238200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr4:57198800-57214400 Weak transcription Gastric stomach
14 chr4:57201800-57212000 Weak transcription Adipose Nuclei Adipose
15 chr4:57202000-57212000 Weak transcription Stomach Smooth Muscle stomach
16 chr4:57202400-57204600 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr4:57202400-57204800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr4:57202600-57204200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr4:57202600-57204200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr4:57202600-57204200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
21 chr4:57202600-57204200 ZNF genes & repeats Fetal Intestine Small intestine
22 chr4:57202600-57204800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr4:57202600-57204800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr4:57202600-57205000 ZNF genes & repeats H1 Cell Line embryonic stem cell
25 chr4:57202600-57205000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
26 chr4:57202600-57205000 Strong transcription Fetal Intestine Large intestine
27 chr4:57202600-57221400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr4:57202800-57204800 Strong transcription Duodenum Mucosa Duodenum
29 chr4:57202800-57204800 Strong transcription Fetal Brain Female brain
30 chr4:57202800-57205200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
31 chr4:57202800-57252400 Weak transcription NHDF-Ad bronchial
32 chr4:57203000-57204200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
33 chr4:57203000-57204400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr4:57203000-57204800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
35 chr4:57203000-57205000 ZNF genes & repeats Primary hematopoietic stem cells blood
36 chr4:57203000-57205200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
37 chr4:57203000-57205200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
38 chr4:57203000-57205200 Strong transcription Brain Germinal Matrix brain
39 chr4:57203000-57252600 Weak transcription Right Ventricle heart
40 chr4:57203200-57204200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
41 chr4:57203200-57204200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr4:57203200-57204200 ZNF genes & repeats Lung lung
43 chr4:57203200-57204400 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
44 chr4:57203200-57204600 Strong transcription Fetal Muscle Trunk muscle
45 chr4:57203200-57204800 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr4:57203200-57204800 Strong transcription Fetal Stomach stomach
47 chr4:57203200-57204800 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr4:57203200-57205000 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
49 chr4:57203200-57205000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr4:57203200-57215000 Weak transcription Colon Smooth Muscle Colon

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