Variant report

Variant rs561011653
Chromosome Location chr18:45661777-45661778
allele -/A
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:45646200-45662000 Weak transcription Right Atrium heart
2 chr18:45658800-45662000 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr18:45659600-45662000 Enhancers Stomach Mucosa stomach
4 chr18:45659800-45661800 Weak transcription Colonic Mucosa Colon
5 chr18:45659800-45661800 Weak transcription Lung lung
6 chr18:45660200-45662200 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr18:45660400-45662200 Weak transcription Pancreas Pancrea
8 chr18:45660400-45662600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr18:45660400-45662600 Enhancers Dnd41 blood
10 chr18:45660600-45662000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
11 chr18:45660800-45662000 Weak transcription Liver Liver
12 chr18:45660800-45662000 Bivalent Enhancer Brain Germinal Matrix brain
13 chr18:45660800-45662000 Weak transcription Brain Inferior Temporal Lobe brain
14 chr18:45660800-45662000 Bivalent Enhancer Fetal Stomach stomach
15 chr18:45660800-45665000 Active TSS Rectal Smooth Muscle rectum
16 chr18:45661000-45662000 Weak transcription Fetal Kidney kidney
17 chr18:45661000-45662000 Bivalent Enhancer Fetal Muscle Trunk muscle
18 chr18:45661200-45661800 Enhancers Hela-S3 cervix
19 chr18:45661200-45662000 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
20 chr18:45661200-45662000 Weak transcription Gastric stomach
21 chr18:45661200-45662200 Weak transcription HMEC breast
22 chr18:45661400-45661800 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr18:45661400-45662200 Flanking Bivalent TSS/Enh Rectal Mucosa Donor 29 rectum
24 chr18:45661400-45663800 Active TSS Esophagus oesophagus
25 chr18:45661600-45662000 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
26 chr18:45661600-45662000 Weak transcription Ovary ovary
27 chr18:45661600-45662200 Weak transcription Spleen Spleen

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