Variant report

Variant rs56110740
Chromosome Location chr1:145556986-145556987
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145549800-145558200 Weak transcription Pancreas Pancrea
2 chr1:145549800-145561800 Weak transcription Right Atrium heart
3 chr1:145550200-145562200 Weak transcription Right Ventricle heart
4 chr1:145550200-145562400 Weak transcription Brain Angular Gyrus brain
5 chr1:145550400-145562400 Weak transcription Brain Hippocampus Middle brain
6 chr1:145550800-145562000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:145551400-145561800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:145554200-145557600 Enhancers Placenta Amnion Placenta Amnion
9 chr1:145554400-145558200 Enhancers Stomach Mucosa stomach
10 chr1:145555000-145557000 Enhancers HMEC breast
11 chr1:145555200-145557600 Enhancers Esophagus oesophagus
12 chr1:145555400-145558600 Enhancers K562 blood
13 chr1:145555400-145561800 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr1:145555600-145562600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:145555800-145557200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:145555800-145557400 Enhancers NHEK skin
17 chr1:145555800-145560000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr1:145556000-145557000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:145556000-145557200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:145556000-145557200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:145556000-145557600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:145556200-145557000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:145556200-145557400 Enhancers Hela-S3 cervix
24 chr1:145556400-145557000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:145556400-145557200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:145556400-145557600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:145556600-145557000 Enhancers Gastric stomach
28 chr1:145556600-145557200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:145556800-145557000 Bivalent Enhancer Placenta Placenta
30 chr1:145556800-145557200 Enhancers H1 Cell Line embryonic stem cell
31 chr1:145556800-145557200 Enhancers NH-A brain
32 chr1:145556800-145557400 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell

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