Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MXI1	chr2:153190466-153194358	SK-N-SH	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:153181849..153185587-chr2:153188964..153191697,3	MCF-7	breast:

Variant related genes	Relation type
FMNL2	TF binding region

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs13034665	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17326796	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17398676	0.89[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17398704	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2002558	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2003332	0.86[AMR][1000 genomes]
rs2003333	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2345878	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35953368	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3887026	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4311022	0.80[AMR][1000 genomes]
rs4519464	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55860423	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56187233	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56313461	0.86[AMR][1000 genomes]
rs6722740	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6725954	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6759036	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7583872	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7584000	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7585911	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3693434	chr2:152998467-153208713	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv834419	chr2:153179420-153381476	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:153187000-153191200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr2:153188800-153191200	Weak transcription	Right Atrium	heart
3	chr2:153190200-153191200	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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