Variant report

Variant rs56115630
Chromosome Location chr15:51344945-51344946
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:51332000-51347000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr15:51336400-51346800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr15:51339600-51345000 Weak transcription HSMM muscle
4 chr15:51339800-51345800 Weak transcription Muscle Satellite Cultured Cells --
5 chr15:51339800-51346800 Weak transcription Aorta Aorta
6 chr15:51339800-51348000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr15:51340000-51347800 Weak transcription HUVEC blood vessel
8 chr15:51340200-51346800 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr15:51340200-51352800 Weak transcription Brain Anterior Caudate brain
10 chr15:51340400-51349600 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr15:51340600-51346800 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr15:51340600-51348800 Weak transcription Stomach Mucosa stomach
13 chr15:51340800-51351800 Weak transcription Fetal Intestine Small intestine
14 chr15:51341600-51350800 Weak transcription HepG2 liver
15 chr15:51341800-51352000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr15:51342000-51347000 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr15:51343600-51345000 Enhancers Adipose Nuclei Adipose
18 chr15:51343600-51345200 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr15:51343600-51345200 Enhancers Fetal Muscle Leg muscle
20 chr15:51343600-51345200 Enhancers Skeletal Muscle Male skeletal muscle
21 chr15:51343600-51345400 Enhancers Colon Smooth Muscle Colon
22 chr15:51343600-51345600 Enhancers Skeletal Muscle Female skeletal muscle
23 chr15:51343600-51346200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr15:51343800-51345000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr15:51343800-51345000 Enhancers Brain Substantia Nigra brain
26 chr15:51343800-51345000 Enhancers Right Atrium heart
27 chr15:51343800-51345400 Enhancers Spleen Spleen
28 chr15:51344000-51345200 Enhancers Fetal Muscle Trunk muscle
29 chr15:51344200-51345400 Enhancers Left Ventricle heart
30 chr15:51344400-51346000 Enhancers Fetal Brain Female brain
31 chr15:51344600-51346200 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr15:51344600-51346200 Weak transcription Fetal Brain Male brain
33 chr15:51344600-51347000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr15:51344600-51347400 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr15:51344600-51348200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr15:51344600-51348400 Weak transcription Rectal Smooth Muscle rectum
37 chr15:51344600-51349800 Weak transcription Brain Inferior Temporal Lobe brain
38 chr15:51344600-51352200 Weak transcription Brain Hippocampus Middle brain
39 chr15:51344600-51384400 Weak transcription Brain Cingulate Gyrus brain
40 chr15:51344800-51345200 Weak transcription Fetal Stomach stomach
41 chr15:51344800-51347400 Weak transcription HSMMtube muscle
42 chr15:51344800-51348000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr15:51344800-51349600 Weak transcription Esophagus oesophagus
44 chr15:51344800-51349600 Weak transcription Ovary ovary
45 chr15:51344800-51353600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr15:51344800-51366800 Weak transcription Right Ventricle heart

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