Variant report

Variant rs561169410
Chromosome Location chr15:78422955-78422956
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78396600-78423800 Weak transcription Placenta Amnion Placenta Amnion
2 chr15:78398400-78423200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr15:78406000-78423000 Weak transcription Stomach Smooth Muscle stomach
4 chr15:78406400-78423000 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr15:78409000-78423000 Weak transcription Brain Anterior Caudate brain
6 chr15:78415200-78423000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr15:78417200-78423200 Weak transcription Adipose Nuclei Adipose
8 chr15:78417800-78423000 Weak transcription Fetal Stomach stomach
9 chr15:78420600-78423000 Weak transcription Stomach Mucosa stomach
10 chr15:78421000-78423000 Enhancers K562 blood
11 chr15:78421200-78423000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
12 chr15:78421200-78423000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr15:78421200-78423200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr15:78421200-78423200 Enhancers Skeletal Muscle Female skeletal muscle
15 chr15:78421200-78423400 Flanking Active TSS Fetal Thymus thymus
16 chr15:78421400-78423000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr15:78421400-78423000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr15:78421400-78423200 Flanking Active TSS Fetal Intestine Large intestine
19 chr15:78421400-78423200 Enhancers Fetal Muscle Trunk muscle
20 chr15:78421400-78423200 Enhancers Fetal Muscle Leg muscle
21 chr15:78421400-78423400 Weak transcription Esophagus oesophagus
22 chr15:78421400-78423400 Flanking Active TSS Fetal Intestine Small intestine
23 chr15:78421600-78423000 Enhancers Cortex derived primary cultured neurospheres brain
24 chr15:78421600-78423200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr15:78421800-78423000 Enhancers Rectal Mucosa Donor 31 rectum
26 chr15:78421800-78423000 Weak transcription HMEC breast
27 chr15:78421800-78423200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
28 chr15:78421800-78423200 Enhancers Fetal Heart heart
29 chr15:78421800-78423400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr15:78421800-78423400 Enhancers Pancreas Pancrea
31 chr15:78422000-78423000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr15:78422000-78423200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr15:78422000-78423200 Enhancers Colonic Mucosa Colon
34 chr15:78422000-78423400 Weak transcription Left Ventricle heart
35 chr15:78422000-78423400 Weak transcription Psoas Muscle Psoas
36 chr15:78422000-78423600 Weak transcription Lung lung
37 chr15:78422000-78424000 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr15:78422200-78423000 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr15:78422200-78423200 Weak transcription Brain Angular Gyrus brain
40 chr15:78422200-78423200 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr15:78422200-78423200 Weak transcription Right Ventricle heart
42 chr15:78422200-78424800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr15:78422400-78423000 Enhancers Brain Germinal Matrix brain
44 chr15:78422400-78423200 Weak transcription Right Atrium heart
45 chr15:78422400-78423400 Flanking Active TSS Fetal Brain Female brain
46 chr15:78422400-78423600 Weak transcription Spleen Spleen
47 chr15:78422400-78423600 Weak transcription Hela-S3 cervix
48 chr15:78422600-78423000 Flanking Active TSS HUES48 Cell Line embryonic stem cell
49 chr15:78422600-78423200 Flanking Active TSS Duodenum Mucosa Duodenum
50 chr15:78422600-78423200 Enhancers Skeletal Muscle Male skeletal muscle

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