Variant report

Variant	rs56132148
Chromosome Location	chr2:73344323-73344324
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs56214999	0.85[EUR][1000 genomes]
rs73943410	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002295	chr2:73216155-73350391	Flanking Bivalent TSS/Enh Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv1006801	chr2:73305056-73431711	Weak transcription Active TSS Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:73341400-73344400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr2:73341600-73344400	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr2:73342200-73344400	Weak transcription	Osteobl	bone
4	chr2:73343600-73345600	Enhancers	Placenta	Placenta
5	chr2:73344000-73345200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr2:73344200-73344600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr2:73344200-73344600	Enhancers	NHLF	lung
8	chr2:73344200-73345000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr2:73344200-73345000	Enhancers	Hela-S3	cervix
10	chr2:73344200-73345000	Enhancers	NHDF-Ad	bronchial
11	chr2:73344200-73345200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr2:73344200-73345200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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