The 2.0 version of rSNPBase

Variant report

Variant rs561358744
Chromosome Location chr10:27118186-27118187
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27085600-27119000 Weak transcription Fetal Lung lung
2 chr10:27095000-27130600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr10:27095000-27138600 Weak transcription Fetal Muscle Trunk muscle
4 chr10:27095200-27119000 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr10:27095400-27129800 Weak transcription NHEK skin
6 chr10:27095600-27129000 Weak transcription Right Atrium heart
7 chr10:27095600-27132600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr10:27095600-27148800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr10:27097200-27120000 Weak transcription HepG2 liver
10 chr10:27099800-27128800 Weak transcription K562 blood
11 chr10:27101800-27129000 Weak transcription Stomach Mucosa stomach
12 chr10:27104800-27119200 Weak transcription Esophagus oesophagus
13 chr10:27104800-27129200 Weak transcription Colonic Mucosa Colon
14 chr10:27105000-27122000 Weak transcription Brain Cingulate Gyrus brain
15 chr10:27106600-27119000 Weak transcription Thymus Thymus
16 chr10:27106600-27122000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr10:27107000-27129000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr10:27107400-27129000 Weak transcription Spleen Spleen
19 chr10:27108000-27120600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr10:27109400-27132600 Weak transcription HMEC breast
21 chr10:27110000-27130400 Weak transcription HUVEC blood vessel
22 chr10:27111400-27125200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr10:27111600-27118800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr10:27111800-27118200 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr10:27111800-27118600 Weak transcription Primary hematopoietic stem cells blood
26 chr10:27111800-27129000 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr10:27111800-27129200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr10:27111800-27147000 Weak transcription Fetal Intestine Large intestine
29 chr10:27112000-27118200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr10:27112000-27118800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr10:27112000-27119400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr10:27112000-27121000 Weak transcription NHDF-Ad bronchial
33 chr10:27112000-27122000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr10:27112000-27126000 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr10:27112000-27128800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr10:27112000-27130400 Weak transcription Muscle Satellite Cultured Cells --
37 chr10:27112200-27118200 Weak transcription GM12878-XiMat blood
38 chr10:27112200-27118600 Weak transcription Primary monocytes fromperipheralblood blood
39 chr10:27112200-27118600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr10:27112200-27119200 Weak transcription Fetal Thymus thymus
41 chr10:27112200-27121000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr10:27112200-27121600 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr10:27112400-27129000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr10:27112600-27118600 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr10:27112600-27118800 Weak transcription Dnd41 blood
46 chr10:27112800-27120800 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr10:27112800-27121600 Weak transcription Left Ventricle heart
48 chr10:27112800-27125000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr10:27112800-27129000 Weak transcription Primary B cells from cord blood blood
50 chr10:27112800-27129000 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015