Variant report

Variant	rs56136056
Chromosome Location	chr9:13763586-13763587
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs17215816	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57092319	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59416705	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60098431	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60195041	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7030346	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73650616	0.88[EUR][1000 genomes]
rs73650631	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7848684	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv892590	chr9:13689066-13777299	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1022001	chr9:13717736-13983738	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13758200-13787200	Weak transcription	Aorta	Aorta
2	chr9:13760000-13764600	Weak transcription	Fetal Muscle Leg	muscle
3	chr9:13762400-13763600	Enhancers	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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