Variant report

Variant	rs561367321
Chromosome Location	chr5:79837264-79837265
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1028027	chr5:79694699-79841752	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv1027183	chr5:79837249-79876229	Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Active TSS Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:79834400-79837400	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr5:79835400-79837400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr5:79835800-79837600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr5:79837200-79837400	Enhancers	Aorta	Aorta
5	chr5:79837200-79837800	Enhancers	Placenta Amnion	Placenta Amnion
6	chr5:79837200-79838000	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr5:79837200-79838400	Strong transcription	Primary neutrophils fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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