Variant report

Variant rs561370586
Chromosome Location chr1:10696227-10696228
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10632600-10698000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:10651600-10715800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:10660200-10697600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr1:10664400-10698000 Weak transcription Primary B cells from cord blood blood
5 chr1:10681200-10697600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:10685200-10699400 Weak transcription Aorta Aorta
7 chr1:10686200-10698000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:10687600-10698000 Weak transcription Small Intestine intestine
9 chr1:10691000-10697400 Weak transcription Gastric stomach
10 chr1:10691400-10697400 Weak transcription Brain Inferior Temporal Lobe brain
11 chr1:10691400-10698000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:10691600-10697200 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr1:10691600-10697400 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr1:10691600-10697600 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr1:10691600-10703000 Weak transcription Primary B cells from peripheral blood blood
16 chr1:10691600-10706000 Weak transcription Dnd41 blood
17 chr1:10691800-10697200 Weak transcription Primary T cells from cord blood blood
18 chr1:10691800-10697800 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr1:10692000-10696600 Bivalent Enhancer Fetal Muscle Trunk muscle
20 chr1:10692000-10697800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:10692400-10699400 Weak transcription Duodenum Mucosa Duodenum
22 chr1:10692600-10697200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:10692600-10698400 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:10693200-10697400 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr1:10693200-10699400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:10693400-10696400 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr1:10693600-10697600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr1:10693600-10698000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr1:10693800-10696800 Enhancers Skeletal Muscle Male skeletal muscle
30 chr1:10693800-10697400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:10694000-10697200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:10694200-10696600 Enhancers Esophagus oesophagus
33 chr1:10694200-10696600 Genic enhancers Fetal Muscle Leg muscle
34 chr1:10694200-10696600 Bivalent Enhancer Fetal Stomach stomach
35 chr1:10694200-10697800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:10694400-10696400 Enhancers Adipose Nuclei Adipose
37 chr1:10694400-10696400 Enhancers Lung lung
38 chr1:10694400-10696600 Enhancers Colon Smooth Muscle Colon
39 chr1:10694400-10696600 Enhancers Placenta Placenta
40 chr1:10694400-10696600 Enhancers Skeletal Muscle Female skeletal muscle
41 chr1:10694400-10697000 Flanking Active TSS HMEC breast
42 chr1:10694400-10699400 Weak transcription Liver Liver
43 chr1:10694600-10696400 Enhancers Right Atrium heart
44 chr1:10694600-10698400 Weak transcription NHLF lung
45 chr1:10694800-10696400 Enhancers Right Ventricle heart
46 chr1:10694800-10696600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:10694800-10696600 Enhancers Psoas Muscle Psoas
48 chr1:10694800-10697800 Enhancers Stomach Mucosa stomach
49 chr1:10695000-10696600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:10695000-10696600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin

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