Variant report

Variant	rs561455080
Chromosome Location	chr4:149099978-149099979
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032794	chr4:149046598-149135489	Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv537295	chr4:149046598-149135489	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv595656	chr4:149098936-149100512	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
4	nsv595657	chr4:149098936-149100721	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
5	esv21049	chr4:149099862-149101623	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
6	nsv595658	chr4:149099889-149100618	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
7	nsv595659	chr4:149099889-149101324	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	nsv595660	chr4:149099889-149101429	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
9	nsv595661	chr4:149099889-149101432	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
10	nsv595662	chr4:149099889-149101503	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	nsv595663	chr4:149099889-149102639	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
12	nsv595664	chr4:149099940-149100779	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
13	nsv595665	chr4:149099940-149101224	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
14	nsv595666	chr4:149099940-149101324	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
15	nsv595667	chr4:149099940-149101429	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
16	nsv595668	chr4:149099940-149101432	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
17	nsv595669	chr4:149099940-149101503	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:149045600-149104800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr4:149084000-149106200	Weak transcription	Lung	lung
3	chr4:149087600-149123400	Weak transcription	Brain Cingulate Gyrus	brain
4	chr4:149088000-149113200	Weak transcription	Adipose Nuclei	Adipose
5	chr4:149088000-149113600	Weak transcription	Rectal Smooth Muscle	rectum
6	chr4:149088400-149113000	Weak transcription	Fetal Muscle Trunk	muscle
7	chr4:149088400-149122800	Weak transcription	Brain Angular Gyrus	brain
8	chr4:149092400-149113400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr4:149093000-149102000	Weak transcription	Duodenum Mucosa	Duodenum
10	chr4:149093000-149102000	Weak transcription	Left Ventricle	heart
11	chr4:149094400-149113200	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr4:149094800-149113200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr4:149094800-149124600	Weak transcription	Aorta	Aorta
14	chr4:149095000-149101200	Weak transcription	Pancreatic Islets	Pancreatic Islet
15	chr4:149095200-149113600	Weak transcription	Pancreas	Pancrea
16	chr4:149095800-149102000	Weak transcription	Psoas Muscle	Psoas
17	chr4:149096000-149102000	Weak transcription	Sigmoid Colon	Sigmoid Colon
18	chr4:149096000-149102600	Weak transcription	Rectal Mucosa Donor 31	rectum
19	chr4:149096600-149104800	Weak transcription	Brain Hippocampus Middle	brain
20	chr4:149099000-149100400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr4:149099000-149102000	Weak transcription	Brain Substantia Nigra	brain
22	chr4:149099000-149116600	Weak transcription	Brain Inferior Temporal Lobe	brain
23	chr4:149099200-149123600	Weak transcription	Brain Anterior Caudate	brain
24	chr4:149099400-149102400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr4:149099800-149100000	Enhancers	Small Intestine	intestine

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