Variant report

Variant rs56149571
Chromosome Location chr1:213328184-213328185
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213284600-213349800 Weak transcription Primary T cells fromperipheralblood blood
2 chr1:213301000-213371000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:213301000-213374800 Weak transcription HSMM muscle
4 chr1:213302600-213358200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr1:213306200-213331600 Weak transcription Brain Cingulate Gyrus brain
6 chr1:213309600-213329000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:213309600-213336000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:213310000-213345800 Weak transcription Lung lung
9 chr1:213310000-213370400 Weak transcription Duodenum Mucosa Duodenum
10 chr1:213310400-213333600 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:213310400-213345800 Weak transcription Ovary ovary
12 chr1:213312000-213340200 Weak transcription HSMMtube muscle
13 chr1:213312200-213340000 Weak transcription Brain Inferior Temporal Lobe brain
14 chr1:213312200-213343600 Weak transcription HepG2 liver
15 chr1:213312400-213336000 Weak transcription Muscle Satellite Cultured Cells --
16 chr1:213313800-213336000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:213316000-213340000 Weak transcription Psoas Muscle Psoas
18 chr1:213316200-213328400 Weak transcription Placenta Placenta
19 chr1:213316400-213336200 Weak transcription NH-A brain
20 chr1:213317400-213349600 Weak transcription Left Ventricle heart
21 chr1:213317800-213331000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:213317800-213351600 Weak transcription Fetal Kidney kidney
23 chr1:213322200-213331600 Weak transcription Brain Anterior Caudate brain
24 chr1:213323000-213346000 Weak transcription Primary B cells from peripheral blood blood
25 chr1:213323000-213349600 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr1:213323200-213345400 Weak transcription Primary B cells from cord blood blood
27 chr1:213325200-213359600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:213325600-213353400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:213326200-213332600 Weak transcription Adipose Nuclei Adipose
30 chr1:213326600-213329400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:213326600-213422200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:213326800-213328400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:213327000-213328200 Enhancers Primary neutrophils fromperipheralblood blood
34 chr1:213327000-213351000 Weak transcription Brain Hippocampus Middle brain
35 chr1:213327200-213328400 Enhancers Primary hematopoietic stem cells blood
36 chr1:213327200-213328400 Strong transcription Fetal Muscle Leg muscle
37 chr1:213327200-213328600 Strong transcription Fetal Adrenal Gland Adrenal Gland
38 chr1:213327200-213329000 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr1:213327400-213328600 Enhancers K562 blood
40 chr1:213327400-213328800 Strong transcription Primary T cells from cord blood blood
41 chr1:213327400-213328800 Enhancers Aorta Aorta
42 chr1:213327400-213329000 Strong transcription Fetal Intestine Large intestine
43 chr1:213327400-213329000 ZNF genes & repeats Fetal Intestine Small intestine
44 chr1:213327400-213329000 Strong transcription Fetal Stomach stomach
45 chr1:213327600-213328200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:213327800-213328200 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr1:213327800-213328200 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:213327800-213328400 Weak transcription Pancreas Pancrea
49 chr1:213327800-213329000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr1:213327800-213345400 Weak transcription Primary monocytes fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links