The 2.0 version of rSNPBase

Variant report

Variant rs561496153
Chromosome Location chr10:97105580-97105581
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97070400-97139600 Weak transcription Fetal Brain Male brain
2 chr10:97079400-97106400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr10:97080000-97109600 Weak transcription Fetal Lung lung
4 chr10:97080400-97106200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr10:97087800-97115400 Weak transcription Colonic Mucosa Colon
6 chr10:97088000-97110600 Weak transcription Duodenum Mucosa Duodenum
7 chr10:97093200-97106400 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr10:97094400-97106600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr10:97094600-97118000 Weak transcription HSMM muscle
10 chr10:97095000-97110600 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr10:97095000-97115200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr10:97096400-97108400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr10:97096400-97110600 Weak transcription H9 Cell Line embryonic stem cell
14 chr10:97096600-97110600 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr10:97096800-97110600 Weak transcription Psoas Muscle Psoas
16 chr10:97097000-97106200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr10:97097800-97110600 Weak transcription Right Atrium heart
18 chr10:97097800-97116000 Weak transcription Spleen Spleen
19 chr10:97099200-97106600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr10:97099200-97106600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr10:97099200-97106600 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr10:97099200-97106800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr10:97099200-97108400 Weak transcription Gastric stomach
24 chr10:97099200-97110600 Weak transcription Lung lung
25 chr10:97099200-97110800 Weak transcription Fetal Intestine Small intestine
26 chr10:97099200-97113400 Weak transcription Ovary ovary
27 chr10:97099200-97115200 Weak transcription Esophagus oesophagus
28 chr10:97099200-97129200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr10:97099400-97106600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr10:97099400-97106600 Weak transcription Pancreas Pancrea
31 chr10:97099400-97110000 Weak transcription HMEC breast
32 chr10:97099400-97110200 Weak transcription Brain Hippocampus Middle brain
33 chr10:97099400-97111000 Weak transcription Brain Substantia Nigra brain
34 chr10:97099600-97105800 Weak transcription GM12878-XiMat blood
35 chr10:97100000-97106600 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr10:97100800-97108600 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr10:97101200-97106600 Weak transcription Right Ventricle heart
38 chr10:97101200-97108400 Weak transcription Fetal Muscle Trunk muscle
39 chr10:97101400-97106600 Weak transcription Fetal Heart heart
40 chr10:97101600-97108600 Strong transcription Stomach Smooth Muscle stomach
41 chr10:97102000-97106400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr10:97102000-97108400 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr10:97102200-97106400 Strong transcription Fetal Stomach stomach
44 chr10:97102200-97136400 Weak transcription Fetal Kidney kidney
45 chr10:97102400-97106600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr10:97102400-97108400 Weak transcription Rectal Smooth Muscle rectum
47 chr10:97103400-97106000 Strong transcription Skeletal Muscle Male skeletal muscle
48 chr10:97103400-97110400 Strong transcription Colon Smooth Muscle Colon
49 chr10:97103400-97110600 Strong transcription Brain Anterior Caudate brain
50 chr10:97103400-97118000 Strong transcription Fetal Brain Female brain

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Last update: Aug 31, 2015