Variant report

Variant	rs561536673
Chromosome Location	chr12:103839356-103839357
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3338592	chr12:103817534-103849094	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv3498252	chr12:103838998-103847126	Enhancers Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3498263	chr12:103839023-103847123	Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv3498274	chr12:103839023-103847123	Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv14469	chr12:103839074-103846962	Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103838200-103840000	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr12:103838400-103840000	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr12:103838400-103840400	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr12:103838800-103839400	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr12:103838800-103839600	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr12:103838800-103839600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr12:103838800-103839800	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr12:103838800-103840200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr12:103839000-103839400	Enhancers	H1 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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