The 2.0 version of rSNPBase

Variant report

Variant rs561541937
Chromosome Location chr8:59361800-59361801
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59324800-59362000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr8:59325200-59370800 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr8:59325800-59363200 Weak transcription Hela-S3 cervix
4 chr8:59326600-59366200 Weak transcription Gastric stomach
5 chr8:59332600-59364800 Weak transcription Rectal Smooth Muscle rectum
6 chr8:59334400-59364200 Weak transcription HMEC breast
7 chr8:59336000-59364800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr8:59336000-59366600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr8:59337800-59363200 Weak transcription Pancreas Pancrea
10 chr8:59339600-59363400 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr8:59342200-59366200 Weak transcription H9 Cell Line embryonic stem cell
12 chr8:59342400-59365400 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr8:59349800-59370800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr8:59351600-59362400 Weak transcription Fetal Stomach stomach
15 chr8:59353400-59364600 Weak transcription Brain Anterior Caudate brain
16 chr8:59353600-59362200 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr8:59353800-59370400 Weak transcription Esophagus oesophagus
18 chr8:59354600-59364200 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr8:59354800-59361800 Weak transcription HSMMtube muscle
20 chr8:59354800-59362400 Weak transcription H1 Cell Line embryonic stem cell
21 chr8:59354800-59362600 Strong transcription Liver Liver
22 chr8:59354800-59362800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr8:59354800-59363200 Weak transcription Fetal Kidney kidney
24 chr8:59354800-59363200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr8:59354800-59363400 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr8:59354800-59363800 Weak transcription Brain Substantia Nigra brain
27 chr8:59354800-59364000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr8:59354800-59364200 Weak transcription NHEK skin
29 chr8:59354800-59364400 Weak transcription Fetal Muscle Leg muscle
30 chr8:59354800-59364600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr8:59354800-59366200 Weak transcription Brain Angular Gyrus brain
32 chr8:59354800-59366600 Weak transcription HepG2 liver
33 chr8:59354800-59367000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr8:59354800-59370200 Weak transcription HSMM muscle
35 chr8:59355000-59363400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr8:59355200-59364200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr8:59355400-59366200 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr8:59355600-59362400 Weak transcription Fetal Heart heart
39 chr8:59355600-59363200 Weak transcription Brain Hippocampus Middle brain
40 chr8:59355600-59364400 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr8:59355600-59366000 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr8:59355800-59369600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr8:59356000-59362000 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr8:59356000-59365800 Weak transcription Colon Smooth Muscle Colon
45 chr8:59357600-59362200 Strong transcription HUES64 Cell Line embryonic stem cell
46 chr8:59358400-59363200 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr8:59359200-59362600 Strong transcription Primary monocytes fromperipheralblood blood
48 chr8:59359200-59363200 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr8:59359400-59362800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
50 chr8:59359400-59363000 Strong transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015