The 2.0 version of rSNPBase

Variant report

Variant rs56158125
Chromosome Location chr1:186391756-186391757
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186345400-186398200 Weak transcription Spleen Spleen
2 chr1:186362400-186405600 Weak transcription Brain Angular Gyrus brain
3 chr1:186362800-186405600 Weak transcription Right Ventricle heart
4 chr1:186365600-186395200 Weak transcription Psoas Muscle Psoas
5 chr1:186366200-186393800 Weak transcription Lung lung
6 chr1:186368600-186398200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:186372000-186392000 Weak transcription Esophagus oesophagus
8 chr1:186372000-186398200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:186372000-186406000 Weak transcription Pancreas Pancrea
10 chr1:186376800-186391800 Weak transcription HepG2 liver
11 chr1:186376800-186399600 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr1:186379200-186395200 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:186380000-186398800 Weak transcription Brain Germinal Matrix brain
14 chr1:186381600-186391800 Weak transcription Placenta Placenta
15 chr1:186388600-186399400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:186388600-186404600 Weak transcription Brain Cingulate Gyrus brain
17 chr1:186388600-186408000 Weak transcription Fetal Brain Female brain
18 chr1:186388600-186411600 Weak transcription A549 lung
19 chr1:186388600-186417400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr1:186388800-186391800 Weak transcription Primary B cells from cord blood blood
21 chr1:186388800-186393400 Weak transcription Fetal Heart heart
22 chr1:186388800-186394800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr1:186388800-186396400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr1:186388800-186397400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:186388800-186405800 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:186388800-186409400 Weak transcription Colon Smooth Muscle Colon
27 chr1:186388800-186409400 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:186389000-186392200 Weak transcription HSMMtube muscle
29 chr1:186389000-186394400 Weak transcription Brain Hippocampus Middle brain
30 chr1:186389000-186413000 Weak transcription Brain Substantia Nigra brain
31 chr1:186389200-186406400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:186389400-186391800 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr1:186389600-186392200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:186389600-186393600 Weak transcription Primary T cells from cord blood blood
35 chr1:186389600-186393600 Weak transcription Left Ventricle heart
36 chr1:186389600-186394400 Weak transcription Brain Inferior Temporal Lobe brain
37 chr1:186389600-186396000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:186389600-186396800 Weak transcription Fetal Muscle Trunk muscle
39 chr1:186389600-186397800 Weak transcription Rectal Smooth Muscle rectum
40 chr1:186389600-186405200 Weak transcription Brain Anterior Caudate brain
41 chr1:186389600-186406800 Weak transcription Fetal Muscle Leg muscle
42 chr1:186389600-186407600 Weak transcription Aorta Aorta
43 chr1:186389600-186407800 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr1:186389600-186409200 Weak transcription HUVEC blood vessel
45 chr1:186389600-186411600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:186389600-186415600 Weak transcription Stomach Smooth Muscle stomach
47 chr1:186389800-186391800 Weak transcription Duodenum Mucosa Duodenum
48 chr1:186389800-186394400 Weak transcription Fetal Brain Male brain
49 chr1:186389800-186409000 Weak transcription Hela-S3 cervix
50 chr1:186389800-186411400 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015