The 2.0 version of rSNPBase

Variant report

Variant rs56158647
Chromosome Location chr1:180141217-180141218
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180124800-180151000 Weak transcription Aorta Aorta
2 chr1:180125200-180150400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:180125600-180159200 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:180126000-180151000 Weak transcription Primary B cells from peripheral blood blood
5 chr1:180126000-180151400 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:180126200-180152400 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr1:180126400-180153800 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr1:180127400-180142800 Weak transcription HSMM muscle
9 chr1:180127600-180142600 Weak transcription Rectal Smooth Muscle rectum
10 chr1:180133000-180143800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:180133400-180153200 Weak transcription Primary hematopoietic stem cells blood
12 chr1:180133800-180152800 Weak transcription Primary B cells from cord blood blood
13 chr1:180134000-180167600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:180134400-180168800 Strong transcription Primary monocytes fromperipheralblood blood
15 chr1:180135000-180169000 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr1:180136200-180167200 Weak transcription Dnd41 blood
17 chr1:180136400-180142800 Weak transcription Adipose Nuclei Adipose
18 chr1:180136400-180142800 Weak transcription Brain Anterior Caudate brain
19 chr1:180136400-180145400 Weak transcription NH-A brain
20 chr1:180136800-180142600 Weak transcription Brain Substantia Nigra brain
21 chr1:180136800-180142800 Weak transcription Brain Cingulate Gyrus brain
22 chr1:180137000-180141600 Strong transcription Fetal Brain Female brain
23 chr1:180137000-180142600 Weak transcription Colon Smooth Muscle Colon
24 chr1:180137000-180142600 Weak transcription Fetal Muscle Leg muscle
25 chr1:180137200-180142200 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr1:180137200-180142800 Weak transcription Fetal Brain Male brain
27 chr1:180137200-180143000 Strong transcription Fetal Stomach stomach
28 chr1:180137200-180148800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:180137200-180153200 Weak transcription H9 Cell Line embryonic stem cell
30 chr1:180137200-180155400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:180137400-180157800 Weak transcription HSMMtube muscle
32 chr1:180137600-180142600 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:180137600-180142800 Weak transcription Brain Angular Gyrus brain
34 chr1:180137600-180142800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr1:180137600-180151200 Weak transcription Thymus Thymus
36 chr1:180137600-180153000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr1:180137800-180148600 Weak transcription HUVEC blood vessel
38 chr1:180137800-180150400 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr1:180137800-180151000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:180137800-180153000 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr1:180137800-180159200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:180138000-180142800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:180138000-180148200 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr1:180138000-180148200 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr1:180138000-180151400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:180138000-180151400 Weak transcription A549 lung
47 chr1:180138000-180153000 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr1:180138200-180153000 Weak transcription Primary T cells fromperipheralblood blood
49 chr1:180138200-180154200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr1:180138200-180158000 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015