Variant report

Variant	rs56158728
Chromosome Location	chr13:37679333-37679334
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs1199963	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948975	chr13:37281203-38280430	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv826612	chr13:37678673-37680292	ZNF genes & repeats Weak transcription Enhancers Strong transcription	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:37673600-37680800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr13:37677000-37680400	Weak transcription	Colon Smooth Muscle	Colon
3	chr13:37677200-37680200	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr13:37677200-37680400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr13:37677200-37680400	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr13:37677400-37680600	Weak transcription	HSMMtube	muscle
7	chr13:37677800-37682200	Strong transcription	Primary neutrophils fromperipheralblood	blood
8	chr13:37678600-37680400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr13:37679000-37679400	Weak transcription	Spleen	Spleen
10	chr13:37679200-37679800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr13:37679200-37679800	ZNF genes & repeats	Fetal Stomach	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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