Variant report

Variant	rs561590792
Chromosome Location	chr8:64110889-64110890
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:64079451..64084180-chr8:64108494..64113879,10	K562	blood:
2	chr8:64109221..64111336-chr8:64112891..64115469,2	K562	blood:
3	chr8:64099330..64103376-chr8:64108595..64113469,4	K562	blood:

Variant related genes	Relation type
ENSG00000270673	Chromatin interaction
ENSG00000185728	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831342	chr8:64084331-64294941	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	esv3362978	chr8:64110597-64111575	Weak transcription Enhancers Strong transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64100000-64118800	Weak transcription	Esophagus	oesophagus
2	chr8:64100400-64112600	Weak transcription	Stomach Mucosa	stomach
3	chr8:64100600-64113200	Weak transcription	Hela-S3	cervix
4	chr8:64100600-64122200	Weak transcription	Fetal Kidney	kidney
5	chr8:64100600-64127000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr8:64100800-64113000	Weak transcription	HSMMtube	muscle
7	chr8:64101200-64117200	Weak transcription	Rectal Smooth Muscle	rectum
8	chr8:64101600-64128000	Weak transcription	Colonic Mucosa	Colon
9	chr8:64101600-64136000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr8:64102200-64112400	Weak transcription	Stomach Smooth Muscle	stomach
11	chr8:64103400-64111800	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr8:64103400-64115800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr8:64103400-64119800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr8:64103400-64127400	Weak transcription	Thymus	Thymus
15	chr8:64103600-64111800	Weak transcription	HepG2	liver
16	chr8:64103600-64112600	Weak transcription	Brain Hippocampus Middle	brain
17	chr8:64103600-64115000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
18	chr8:64103600-64119800	Enhancers	Primary T helper cells fromperipheralblood	blood
19	chr8:64103600-64120600	Weak transcription	Dnd41	blood
20	chr8:64103600-64121400	Weak transcription	Fetal Thymus	thymus
21	chr8:64103600-64122200	Weak transcription	Placenta	Placenta
22	chr8:64103600-64129800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr8:64104000-64111800	Weak transcription	Duodenum Mucosa	Duodenum
24	chr8:64104200-64111800	Weak transcription	Fetal Intestine Large	intestine
25	chr8:64104400-64124800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr8:64105000-64111200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
27	chr8:64105000-64112400	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr8:64105200-64112600	Weak transcription	A549	lung
29	chr8:64105200-64112800	Weak transcription	Primary hematopoietic stem cells	blood
30	chr8:64105200-64114000	Enhancers	Primary T helper cells PMA-I stimulated	--
31	chr8:64105200-64122400	Weak transcription	NHDF-Ad	bronchial
32	chr8:64105400-64111800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
33	chr8:64105400-64111800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
34	chr8:64105400-64112600	Weak transcription	NH-A	brain
35	chr8:64105400-64113400	Weak transcription	HSMM	muscle
36	chr8:64105400-64114400	Weak transcription	Fetal Lung	lung
37	chr8:64105400-64122200	Weak transcription	K562	blood
38	chr8:64105600-64116400	Weak transcription	Cortex derived primary cultured neurospheres	brain
39	chr8:64105600-64116400	Weak transcription	Brain Substantia Nigra	brain
40	chr8:64105800-64111800	Weak transcription	Primary B cells from peripheral blood	blood
41	chr8:64105800-64111800	Weak transcription	Small Intestine	intestine
42	chr8:64105800-64112600	Weak transcription	Aorta	Aorta
43	chr8:64105800-64114400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr8:64105800-64119000	Weak transcription	HUES6 Cell Line	embryonic stem cell
45	chr8:64105800-64122200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr8:64106200-64115200	Weak transcription	Fetal Stomach	stomach
47	chr8:64107000-64127200	Weak transcription	Fetal Muscle Leg	muscle
48	chr8:64107000-64132000	Weak transcription	Fetal Muscle Trunk	muscle
49	chr8:64107400-64111800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr8:64107400-64117200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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