Variant report

Variant	rs561636722
Chromosome Location	chr8:1835906-1835907
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 53 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:53 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889697	chr8:1238564-1861971	Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	nsv889704	chr8:1563904-1965389	Flanking Active TSS Enhancers Genic enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv889707	chr8:1581839-1920461	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
4	nsv889708	chr8:1581839-1965389	Genic enhancers Strong transcription Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
5	nsv889709	chr8:1581839-1965389	Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
6	nsv889711	chr8:1591412-1904157	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
7	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
8	nsv889714	chr8:1616718-1965389	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
9	nsv532892	chr8:1687433-1839578	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
10	nsv609531	chr8:1717036-1965389	Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
11	nsv1025444	chr8:1743663-1864809	Genic enhancers Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
12	nsv539299	chr8:1743663-1864809	Active TSS Weak transcription Strong transcription Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
13	nsv470167	chr8:1746949-1886640	Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
14	nsv465277	chr8:1746950-1888447	Weak transcription Strong transcription Enhancers Genic enhancers Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
15	nsv609533	chr8:1746950-1888447	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
16	nsv889717	chr8:1746950-1924237	Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
17	nsv1017597	chr8:1748941-1865887	Weak transcription Transcr. at gene 5' and 3' Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
18	nsv889722	chr8:1756800-1857293	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
19	nsv889723	chr8:1756800-1904157	Enhancers Strong transcription Genic enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
20	nsv889724	chr8:1756800-1965389	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
21	nsv1031464	chr8:1763119-1848596	Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
22	nsv889728	chr8:1768004-1850622	Strong transcription Enhancers Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
23	nsv889729	chr8:1800560-1947417	Genic enhancers Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
24	nsv831207	chr8:1803355-1888324	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
25	nsv6046	chr8:1816569-1861304	Strong transcription Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
26	nsv889730	chr8:1821516-1883352	Weak transcription Enhancers Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
27	nsv511395	chr8:1833801-1838038	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	n/a	n/a	inside rSNPs	diseases
28	esv1824729	chr8:1834709-1838759	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	n/a	n/a	inside rSNPs	diseases
29	esv1806472	chr8:1834709-1840937	Strong transcription Weak transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
30	esv3503521	chr8:1835145-1839143	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
31	esv3403943	chr8:1835145-1839843	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
32	esv1795977	chr8:1835407-1838759	Strong transcription Weak transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
33	esv1808089	chr8:1835407-1838759	Weak transcription Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
34	esv1826747	chr8:1835407-1838759	Strong transcription Weak transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
35	esv1833535	chr8:1835407-1838759	Strong transcription Weak transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
36	esv1851559	chr8:1835407-1838759	Weak transcription Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
37	esv1803095	chr8:1835407-1839025	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	inside rSNPs	diseases
38	nsv824456	chr8:1835419-1838825	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	inside rSNPs	diseases
39	esv15993	chr8:1835429-1840933	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
40	nsv824457	chr8:1835445-1838825	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	inside rSNPs	diseases
41	esv1821562	chr8:1835541-1838892	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	inside rSNPs	diseases
42	esv3503524	chr8:1835545-1839093	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	inside rSNPs	diseases
43	esv21067	chr8:1835579-1838789	Strong transcription Weak transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
44	nsv824458	chr8:1835624-1838825	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	inside rSNPs	diseases
45	esv1821952	chr8:1835675-1838759	Weak transcription Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
46	esv1809083	chr8:1835675-1839025	Enhancers Strong transcription Weak transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
47	esv1817790	chr8:1835675-1839025	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	inside rSNPs	diseases
48	nsv824459	chr8:1835708-1838825	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	inside rSNPs	diseases
49	esv1848809	chr8:1835773-1838892	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	inside rSNPs	diseases
50	esv1844725	chr8:1835773-1839225	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:1774000-1845000	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr8:1802200-1845000	Weak transcription	Right Atrium	heart
3	chr8:1806000-1844000	Strong transcription	HUES48 Cell Line	embryonic stem cell
4	chr8:1806400-1839800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
5	chr8:1808600-1848400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
6	chr8:1812000-1840400	Weak transcription	Fetal Brain Male	brain
7	chr8:1813000-1840800	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr8:1816200-1845000	Weak transcription	Hela-S3	cervix
9	chr8:1817000-1836600	Weak transcription	Fetal Kidney	kidney
10	chr8:1817000-1838000	Weak transcription	Rectal Smooth Muscle	rectum
11	chr8:1819000-1853200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr8:1820200-1842800	Weak transcription	Primary hematopoietic stem cells	blood
13	chr8:1820600-1840000	Strong transcription	H9 Cell Line	embryonic stem cell
14	chr8:1822000-1844000	Strong transcription	HUES6 Cell Line	embryonic stem cell
15	chr8:1822200-1844400	Strong transcription	HUES64 Cell Line	embryonic stem cell
16	chr8:1822600-1839800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr8:1822800-1858200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr8:1823600-1836400	Strong transcription	H1 Cell Line	embryonic stem cell
19	chr8:1823800-1838800	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr8:1823800-1839600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr8:1824200-1840000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr8:1824400-1841000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr8:1824400-1864800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
24	chr8:1827800-1844000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
25	chr8:1828600-1858800	Weak transcription	Colonic Mucosa	Colon
26	chr8:1829400-1836200	Strong transcription	Fetal Muscle Leg	muscle
27	chr8:1830400-1839800	Strong transcription	Fetal Brain Female	brain
28	chr8:1831400-1836600	Weak transcription	Skeletal Muscle Female	skeletal muscle
29	chr8:1831400-1839000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr8:1831400-1840800	Weak transcription	Fetal Heart	heart
31	chr8:1831800-1839000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr8:1832000-1836400	Strong transcription	Ovary	ovary
33	chr8:1832000-1841600	Weak transcription	NHDF-Ad	bronchial
34	chr8:1832200-1839000	Strong transcription	Fetal Muscle Trunk	muscle
35	chr8:1832400-1840800	Weak transcription	Stomach Mucosa	stomach
36	chr8:1832600-1842400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
37	chr8:1833000-1838800	Strong transcription	Adipose Nuclei	Adipose
38	chr8:1833200-1836200	Strong transcription	HSMMtube	muscle
39	chr8:1833200-1839200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr8:1833400-1839200	Strong transcription	ES-I3 Cell Line	embryonic stem cell
41	chr8:1833600-1836200	Strong transcription	Osteobl	bone
42	chr8:1833600-1838600	Strong transcription	iPS-15b Cell Line	embryonic stem cell
43	chr8:1833800-1836000	Strong transcription	Duodenum Smooth Muscle	Duodenum
44	chr8:1833800-1836200	Strong transcription	Left Ventricle	heart
45	chr8:1833800-1836200	Strong transcription	NHEK	skin
46	chr8:1833800-1836400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr8:1833800-1836400	Strong transcription	Lung	lung
48	chr8:1833800-1836600	Strong transcription	Cortex derived primary cultured neurospheres	brain
49	chr8:1833800-1836800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr8:1833800-1837200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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