The 2.0 version of rSNPBase

Variant report

Variant rs561678873
Chromosome Location chr14:71213601-71213602
allele -/A
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:71185800-71219200 Weak transcription Stomach Mucosa stomach
2 chr14:71186000-71221600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr14:71186000-71221600 Weak transcription Hela-S3 cervix
4 chr14:71190000-71214400 Weak transcription Rectal Smooth Muscle rectum
5 chr14:71191400-71220000 Weak transcription Fetal Brain Male brain
6 chr14:71191600-71220200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr14:71192400-71220200 Weak transcription Fetal Kidney kidney
8 chr14:71192600-71221800 Weak transcription Placenta Amnion Placenta Amnion
9 chr14:71194000-71222000 Weak transcription HSMMtube muscle
10 chr14:71194400-71221600 Weak transcription Left Ventricle heart
11 chr14:71194600-71218600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr14:71194600-71221600 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr14:71196200-71217000 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr14:71197000-71228800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr14:71197600-71217000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr14:71198400-71223400 Weak transcription Primary hematopoietic stem cells blood
17 chr14:71199600-71219600 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr14:71200200-71216400 Weak transcription Brain Hippocampus Middle brain
19 chr14:71200400-71215400 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr14:71200600-71224200 Weak transcription Spleen Spleen
21 chr14:71201200-71215200 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr14:71201200-71228000 Weak transcription Colonic Mucosa Colon
23 chr14:71201600-71219000 Weak transcription Lung lung
24 chr14:71201600-71220600 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr14:71204800-71229400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr14:71205000-71219000 Weak transcription Brain Angular Gyrus brain
27 chr14:71205400-71220400 Weak transcription Small Intestine intestine
28 chr14:71206000-71218200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr14:71206800-71215000 Weak transcription Aorta Aorta
30 chr14:71206800-71221000 Weak transcription Stomach Smooth Muscle stomach
31 chr14:71206800-71231600 Weak transcription Brain Anterior Caudate brain
32 chr14:71207000-71215200 Weak transcription HepG2 liver
33 chr14:71207000-71215400 Weak transcription GM12878-XiMat blood
34 chr14:71207000-71221800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr14:71207000-71221800 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr14:71207200-71214000 Weak transcription Primary T cells from cord blood blood
37 chr14:71207600-71214600 Weak transcription Dnd41 blood
38 chr14:71207800-71215200 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr14:71208600-71215000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr14:71209000-71215400 Weak transcription Liver Liver
41 chr14:71209200-71215400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr14:71209200-71229400 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr14:71209400-71213800 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr14:71209400-71214400 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr14:71209400-71215000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr14:71209400-71215000 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr14:71209400-71215000 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr14:71209400-71215200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr14:71209400-71215200 Weak transcription Placenta Placenta
50 chr14:71209400-71219000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015