Variant report
| Variant | rs56176440 |
|---|---|
| Chromosome Location | chr12:46228480-46228481 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:46164600-46230000 | Weak transcription | Thymus | Thymus |
| 2 | chr12:46177600-46243400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 3 | chr12:46182600-46230600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 4 | chr12:46183800-46243400 | Weak transcription | Small Intestine | intestine |
| 5 | chr12:46184600-46231200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 6 | chr12:46186000-46233400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 7 | chr12:46186800-46243400 | Weak transcription | HSMMtube | muscle |
| 8 | chr12:46196400-46243200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 9 | chr12:46198000-46229600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 10 | chr12:46200600-46244000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 11 | chr12:46201800-46233200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 12 | chr12:46202200-46233200 | Weak transcription | Brain Hippocampus Middle | brain |
| 13 | chr12:46202600-46233400 | Weak transcription | Brain Substantia Nigra | brain |
| 14 | chr12:46202600-46243400 | Weak transcription | Aorta | Aorta |
| 15 | chr12:46202800-46230400 | Weak transcription | Left Ventricle | heart |
| 16 | chr12:46202800-46237800 | Weak transcription | Lung | lung |
| 17 | chr12:46202800-46243200 | Weak transcription | Ovary | ovary |
| 18 | chr12:46202800-46243200 | Weak transcription | Right Ventricle | heart |
| 19 | chr12:46203800-46243800 | Weak transcription | Spleen | Spleen |
| 20 | chr12:46204000-46230200 | Weak transcription | Brain Anterior Caudate | brain |
| 21 | chr12:46204000-46233600 | Weak transcription | Psoas Muscle | Psoas |
| 22 | chr12:46204200-46233200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 23 | chr12:46205000-46230200 | Weak transcription | Osteobl | bone |
| 24 | chr12:46207000-46230200 | Weak transcription | HMEC | breast |
| 25 | chr12:46207400-46244400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 26 | chr12:46213200-46233200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 27 | chr12:46214400-46244000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 28 | chr12:46214600-46233600 | Weak transcription | Colon Smooth Muscle | Colon |
| 29 | chr12:46214800-46233600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 30 | chr12:46215800-46230200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 31 | chr12:46215800-46233000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 32 | chr12:46215800-46244000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 33 | chr12:46216200-46230200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 34 | chr12:46216200-46233400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 35 | chr12:46216200-46244000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 36 | chr12:46216400-46233000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 37 | chr12:46216400-46233000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 38 | chr12:46217000-46230400 | Weak transcription | Hela-S3 | cervix |
| 39 | chr12:46217200-46231200 | Weak transcription | NHEK | skin |
| 40 | chr12:46217800-46229800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 41 | chr12:46218000-46230200 | Weak transcription | HUVEC | blood vessel |
| 42 | chr12:46218000-46233200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 43 | chr12:46218200-46230200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 44 | chr12:46218200-46230200 | Weak transcription | NH-A | brain |
| 45 | chr12:46218200-46230600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 46 | chr12:46218200-46230600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 47 | chr12:46218400-46230000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 48 | chr12:46218400-46230200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 49 | chr12:46218400-46230600 | Weak transcription | Adipose Nuclei | Adipose |
| 50 | chr12:46218600-46229600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
