Variant report

Variant	rs561772905
Chromosome Location	chr15:75257741-75257742
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv569993	chr15:75242155-75483752	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
2	nsv1612	chr15:75247725-75281284	Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
3	nsv977735	chr15:75257534-75268830	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:75255800-75258000	Enhancers	HUVEC	blood vessel
2	chr15:75256400-75257800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr15:75256600-75258000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr15:75256800-75257800	Enhancers	Fetal Lung	lung
5	chr15:75256800-75257800	Enhancers	HSMM	muscle
6	chr15:75256800-75257800	Enhancers	NHEK	skin
7	chr15:75257000-75257800	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr15:75257000-75257800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr15:75257000-75257800	Enhancers	Brain Germinal Matrix	brain
10	chr15:75257000-75257800	Enhancers	A549	lung
11	chr15:75257000-75257800	Enhancers	HSMMtube	muscle
12	chr15:75257200-75257800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr15:75257200-75257800	Enhancers	HUES64 Cell Line	embryonic stem cell
14	chr15:75257200-75257800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr15:75257200-75257800	Bivalent Enhancer	HepG2	liver
16	chr15:75257400-75259800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr15:75257600-75257800	Enhancers	Pancreatic Islets	Pancreatic Islet
18	chr15:75257600-75258600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr15:75257600-75270800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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