The 2.0 version of rSNPBase

Variant report

Variant rs561774
Chromosome Location chr11:94340838-94340839
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:94296600-94344800 Weak transcription Left Ventricle heart
2 chr11:94308200-94342800 Weak transcription K562 blood
3 chr11:94309200-94342600 Weak transcription Primary hematopoietic stem cells blood
4 chr11:94321000-94344800 Weak transcription Lung lung
5 chr11:94321400-94342600 Weak transcription Fetal Brain Female brain
6 chr11:94322200-94343600 Weak transcription Psoas Muscle Psoas
7 chr11:94322600-94341600 Weak transcription Right Ventricle heart
8 chr11:94323000-94341000 Weak transcription Gastric stomach
9 chr11:94323600-94351800 Weak transcription Rectal Smooth Muscle rectum
10 chr11:94324600-94343600 Weak transcription Spleen Spleen
11 chr11:94324800-94341000 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr11:94325000-94341000 Weak transcription Ovary ovary
13 chr11:94325000-94344400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr11:94325200-94357600 Weak transcription Placenta Amnion Placenta Amnion
15 chr11:94326400-94342400 Weak transcription Brain Inferior Temporal Lobe brain
16 chr11:94329000-94341000 Weak transcription Fetal Muscle Leg muscle
17 chr11:94329200-94343000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr11:94329400-94342200 Weak transcription Primary T cells from cord blood blood
19 chr11:94330200-94341000 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr11:94332600-94342400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr11:94333000-94343200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr11:94333000-94346200 Weak transcription Stomach Smooth Muscle stomach
23 chr11:94333200-94341000 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr11:94333200-94343000 Weak transcription Brain Cingulate Gyrus brain
25 chr11:94333400-94341000 Weak transcription Aorta Aorta
26 chr11:94333400-94341000 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr11:94336200-94342400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr11:94336400-94341400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr11:94336400-94342600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr11:94336400-94343000 Weak transcription Brain Anterior Caudate brain
31 chr11:94336400-94343800 Weak transcription Brain Substantia Nigra brain
32 chr11:94336400-94349600 Weak transcription Stomach Mucosa stomach
33 chr11:94336400-94350200 Weak transcription Brain Angular Gyrus brain
34 chr11:94336600-94341000 Weak transcription Pancreas Pancrea
35 chr11:94336600-94343400 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr11:94338400-94341000 Weak transcription Adipose Nuclei Adipose
37 chr11:94339200-94341600 Strong transcription Fetal Intestine Small intestine
38 chr11:94339200-94342800 Strong transcription Primary neutrophils fromperipheralblood blood
39 chr11:94339600-94342400 Strong transcription Fetal Intestine Large intestine
40 chr11:94339800-94341200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr11:94340200-94345400 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr11:94340600-94343400 Strong transcription Primary monocytes fromperipheralblood blood
43 chr11:94340800-94341600 Strong transcription Colonic Mucosa Colon
44 chr11:94340800-94341600 Strong transcription Fetal Stomach stomach
45 chr11:94340800-94342600 Strong transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015