Variant report

Variant rs561833087
Chromosome Location chr17:59477357-59477358
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:59473400-59479800 Bivalent Enhancer Primary T cells fromperipheralblood blood
2 chr17:59473600-59477400 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
3 chr17:59474200-59479000 Active TSS Aorta Aorta
4 chr17:59474200-59481000 Active TSS NHDF-Ad bronchial
5 chr17:59474400-59479800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
6 chr17:59474800-59477400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
7 chr17:59475000-59479200 Active TSS HSMM muscle
8 chr17:59475000-59480400 Bivalent/Poised TSS Fetal Intestine Small intestine
9 chr17:59475400-59478800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr17:59475400-59479600 Bivalent/Poised TSS Rectal Smooth Muscle rectum
11 chr17:59475800-59477400 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
12 chr17:59475800-59478200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
13 chr17:59475800-59479400 Active TSS Osteobl bone
14 chr17:59476000-59478000 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
15 chr17:59476000-59478200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
16 chr17:59476200-59477400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
17 chr17:59476200-59477400 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr17:59476200-59477400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr17:59476200-59477400 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr17:59476200-59478000 Active TSS A549 lung
21 chr17:59476200-59478200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
22 chr17:59476200-59478200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
23 chr17:59476200-59478200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
24 chr17:59476200-59478200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
25 chr17:59476200-59478200 Bivalent/Poised TSS Fetal Intestine Large intestine
26 chr17:59476200-59478400 Active TSS Hela-S3 cervix
27 chr17:59476200-59478600 Active TSS Breast Myoepithelial Primary Cells Breast
28 chr17:59476200-59478600 Active TSS Muscle Satellite Cultured Cells --
29 chr17:59476200-59478600 Active TSS Fetal Kidney kidney
30 chr17:59476200-59478800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr17:59476200-59479000 Active TSS HSMMtube muscle
32 chr17:59476200-59479600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr17:59476400-59477400 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
34 chr17:59476400-59477400 Enhancers Fetal Heart heart
35 chr17:59476400-59477400 Bivalent/Poised TSS HepG2 liver
36 chr17:59476400-59477400 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
37 chr17:59476400-59477600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
38 chr17:59476400-59478000 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr17:59476400-59478000 Active TSS Fetal Lung lung
40 chr17:59476400-59478000 Active TSS NHLF lung
41 chr17:59476400-59478200 Active TSS Pancreatic Islets Pancreatic Islet
42 chr17:59476400-59478200 Active TSS Rectal Mucosa Donor 31 rectum
43 chr17:59476400-59478200 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
44 chr17:59476400-59478400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
45 chr17:59476400-59478600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr17:59476400-59478600 Bivalent/Poised TSS Thymus Thymus
47 chr17:59476400-59479000 Active TSS Ovary ovary
48 chr17:59476400-59479400 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr17:59476600-59477400 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr17:59476600-59477800 Enhancers Liver Liver

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