The 2.0 version of rSNPBase

Variant report

Variant rs561834883
Chromosome Location chr1:94504799-94504800
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94488200-94505000 Weak transcription Spleen Spleen
2 chr1:94492200-94510000 Weak transcription Aorta Aorta
3 chr1:94496800-94508400 Weak transcription Gastric stomach
4 chr1:94497200-94505000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr1:94497400-94505000 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:94497600-94505000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:94497600-94505200 Weak transcription Lung lung
8 chr1:94501200-94506000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:94501400-94505200 Enhancers Hela-S3 cervix
10 chr1:94501800-94510000 Weak transcription Pancreas Pancrea
11 chr1:94502000-94505800 Enhancers Osteobl bone
12 chr1:94502000-94506000 Enhancers Placenta Amnion Placenta Amnion
13 chr1:94502000-94506800 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr1:94502600-94505200 Enhancers HSMMtube muscle
15 chr1:94502600-94505600 Enhancers HMEC breast
16 chr1:94502600-94505800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:94502800-94507000 Enhancers Fetal Muscle Leg muscle
18 chr1:94503200-94506400 Enhancers Muscle Satellite Cultured Cells --
19 chr1:94503400-94505000 Weak transcription Fetal Muscle Trunk muscle
20 chr1:94503400-94505000 Weak transcription A549 lung
21 chr1:94503600-94505200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:94503800-94505000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:94503800-94505000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:94503800-94505000 Weak transcription Right Atrium heart
25 chr1:94503800-94505000 Weak transcription HepG2 liver
26 chr1:94503800-94505200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr1:94503800-94505200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:94503800-94505400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:94503800-94510200 Weak transcription Ovary ovary
30 chr1:94504000-94505000 Weak transcription NHEK skin
31 chr1:94504000-94505200 Enhancers HSMM muscle
32 chr1:94504000-94505400 Enhancers Cortex derived primary cultured neurospheres brain
33 chr1:94504000-94505600 Enhancers iPS-20b Cell Line embryonic stem cell
34 chr1:94504000-94505600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:94504000-94506200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:94504000-94506600 Enhancers HUVEC blood vessel
37 chr1:94504200-94505600 Enhancers HUES64 Cell Line embryonic stem cell
38 chr1:94504200-94505800 Enhancers Skeletal Muscle Male skeletal muscle
39 chr1:94504200-94506000 Enhancers NH-A brain
40 chr1:94504200-94506400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:94504400-94504800 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:94504400-94505400 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:94504400-94505400 Weak transcription H1 Cell Line embryonic stem cell
44 chr1:94504600-94504800 Enhancers Colonic Mucosa Colon
45 chr1:94504600-94504800 Bivalent Enhancer Stomach Smooth Muscle stomach
46 chr1:94504600-94505400 Weak transcription Fetal Stomach stomach
47 chr1:94504600-94505800 Enhancers Adipose Nuclei Adipose
48 chr1:94504600-94506000 Enhancers Left Ventricle heart

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Last update: Aug 31, 2015