Variant report

Variant	rs561931222
Chromosome Location	chr6:73684210-73684211
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830691	chr6:73530978-73743648	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	3 gene(s)	inside rSNPs	diseases
2	nsv521957	chr6:73683775-73687752	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:73607600-73715400	Weak transcription	Primary B cells from cord blood	blood
2	chr6:73666200-73686000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr6:73673000-73688000	Weak transcription	Primary T cells from cord blood	blood
4	chr6:73676600-73687000	Weak transcription	Primary hematopoietic stem cells	blood
5	chr6:73679000-73685000	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr6:73679000-73685400	Weak transcription	HSMMtube	muscle
7	chr6:73679200-73686000	Weak transcription	HSMM	muscle
8	chr6:73679600-73686200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr6:73681800-73687400	Enhancers	Fetal Heart	heart
10	chr6:73682800-73685000	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr6:73682800-73687000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr6:73683400-73686000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr6:73684000-73687600	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr6:73684200-73684400	Enhancers	Skeletal Muscle Female	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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