Variant report

Variant	rs562000519
Chromosome Location	chr1:70379254-70379255
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428466	chr1:70306638-70455357	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv947491	chr1:70377933-70382966	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:70377000-70381200	Enhancers	HUVEC	blood vessel
2	chr1:70377200-70380000	Enhancers	Muscle Satellite Cultured Cells	--
3	chr1:70377400-70380000	Weak transcription	NHLF	lung
4	chr1:70377400-70380600	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr1:70377600-70379400	Weak transcription	Fetal Stomach	stomach
6	chr1:70377600-70380000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr1:70377800-70380400	Weak transcription	NHDF-Ad	bronchial
8	chr1:70377800-70380600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr1:70378000-70379400	Weak transcription	Osteobl	bone
10	chr1:70378200-70380000	Weak transcription	Adipose Nuclei	Adipose
11	chr1:70378400-70379400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr1:70378400-70379600	Weak transcription	HSMM	muscle
13	chr1:70378400-70380600	Weak transcription	Primary monocytes fromperipheralblood	blood
14	chr1:70378600-70379800	Weak transcription	Hela-S3	cervix
15	chr1:70379200-70379600	Enhancers	Fetal Muscle Trunk	muscle
16	chr1:70379200-70379800	Enhancers	Fetal Muscle Leg	muscle
17	chr1:70379200-70380000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr1:70379200-70380000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr1:70379200-70380800	Enhancers	Ovary	ovary
20	chr1:70379200-70381000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr1:70379200-70381000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
22	chr1:70379200-70381600	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr1:70379200-70381600	Enhancers	Fetal Lung	lung

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