Variant report

Variant rs56200787
Chromosome Location chr2:47252501-47252502
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:47213600-47256400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:47214000-47262000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
3 chr2:47222000-47260600 Weak transcription Small Intestine intestine
4 chr2:47230200-47302800 Strong transcription Dnd41 blood
5 chr2:47232000-47265000 Strong transcription Primary T helper cells fromperipheralblood blood
6 chr2:47232400-47257000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr2:47234400-47283600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr2:47236000-47278600 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr2:47236600-47253600 Strong transcription Fetal Intestine Small intestine
10 chr2:47236600-47259200 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr2:47236600-47259200 Weak transcription Fetal Kidney kidney
12 chr2:47237000-47254200 Weak transcription Ovary ovary
13 chr2:47237000-47260400 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr2:47238200-47253400 Strong transcription Placenta Amnion Placenta Amnion
15 chr2:47238200-47253600 Strong transcription Duodenum Mucosa Duodenum
16 chr2:47238200-47253800 Strong transcription HepG2 liver
17 chr2:47240200-47256000 Weak transcription H9 Cell Line embryonic stem cell
18 chr2:47242200-47253400 Weak transcription HMEC breast
19 chr2:47243800-47260200 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr2:47243800-47260400 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr2:47243800-47260800 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr2:47243800-47261000 Weak transcription K562 blood
23 chr2:47244000-47252800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr2:47244000-47253200 Weak transcription Stomach Mucosa stomach
25 chr2:47244000-47254200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr2:47244000-47256000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:47244000-47256800 Strong transcription Osteobl bone
28 chr2:47244000-47257200 Weak transcription HUVEC blood vessel
29 chr2:47244000-47258800 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr2:47244000-47260600 Weak transcription H1 Cell Line embryonic stem cell
31 chr2:47244200-47261200 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr2:47244400-47257000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr2:47244600-47257000 Strong transcription NHLF lung
34 chr2:47244600-47258800 Strong transcription Primary monocytes fromperipheralblood blood
35 chr2:47244800-47256200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr2:47244800-47256800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:47244800-47258800 Strong transcription Placenta Placenta
38 chr2:47245000-47255600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr2:47245800-47253000 Strong transcription A549 lung
40 chr2:47245800-47254400 Strong transcription Lung lung
41 chr2:47245800-47255000 Genic enhancers Fetal Thymus thymus
42 chr2:47245800-47268600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
43 chr2:47246000-47260400 Strong transcription Primary B cells from cord blood blood
44 chr2:47246000-47260800 Strong transcription Primary B cells from peripheral blood blood
45 chr2:47246000-47260800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr2:47246000-47261800 Strong transcription Primary T helper naive cells fromperipheralblood blood
47 chr2:47246000-47283800 Strong transcription Primary T regulatory cells fromperipheralblood blood
48 chr2:47246200-47261400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr2:47246600-47253200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr2:47246800-47281600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood

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