The 2.0 version of rSNPBase

Variant report

Variant rs56209623
Chromosome Location chr11:94307859-94307860
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:94281000-94319200 Weak transcription Aorta Aorta
2 chr11:94282200-94317400 Weak transcription Stomach Smooth Muscle stomach
3 chr11:94282200-94322600 Weak transcription Brain Anterior Caudate brain
4 chr11:94282600-94322200 Weak transcription Fetal Stomach stomach
5 chr11:94284000-94323400 Weak transcription Fetal Muscle Leg muscle
6 chr11:94291800-94322000 Weak transcription Colon Smooth Muscle Colon
7 chr11:94293000-94322400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr11:94293600-94322400 Weak transcription Gastric stomach
9 chr11:94296600-94344800 Weak transcription Left Ventricle heart
10 chr11:94297200-94322200 Weak transcription Rectal Smooth Muscle rectum
11 chr11:94297400-94310000 Weak transcription Duodenum Mucosa Duodenum
12 chr11:94303000-94325400 Weak transcription Brain Cingulate Gyrus brain
13 chr11:94303600-94314600 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr11:94304400-94319600 Weak transcription Fetal Intestine Small intestine
15 chr11:94307000-94308200 Enhancers Placenta Amnion Placenta Amnion
16 chr11:94307200-94308200 Flanking Active TSS Primary monocytes fromperipheralblood blood
17 chr11:94307200-94308400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr11:94307200-94309400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr11:94307400-94308000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr11:94307400-94308000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr11:94307400-94308000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr11:94307400-94308000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr11:94307400-94308000 Active TSS Primary hematopoietic stem cells blood
24 chr11:94307400-94308000 Flanking Active TSS Osteobl bone
25 chr11:94307400-94308200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr11:94307400-94308200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
27 chr11:94307400-94308200 Enhancers K562 blood
28 chr11:94307600-94308000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr11:94307600-94308000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr11:94307600-94308000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:94307600-94308000 Enhancers Placenta Placenta
32 chr11:94307600-94308000 Enhancers Pancreas Pancrea
33 chr11:94307600-94308000 Active TSS Monocytes-CD14+_RO01746 blood
34 chr11:94307600-94308200 Enhancers HSMMtube muscle
35 chr11:94307600-94308400 Enhancers Muscle Satellite Cultured Cells --
36 chr11:94307600-94324000 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr11:94307800-94308000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
38 chr11:94307800-94308000 Active TSS Adipose Nuclei Adipose
39 chr11:94307800-94308000 Enhancers Ovary ovary
40 chr11:94307800-94308000 Enhancers NHDF-Ad bronchial
41 chr11:94307800-94308200 Flanking Active TSS Primary B cells from cord blood blood
42 chr11:94307800-94308200 Enhancers Duodenum Smooth Muscle Duodenum
43 chr11:94307800-94308600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr11:94307800-94308800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr11:94307800-94316800 Weak transcription Fetal Intestine Large intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015