Variant report

Variant	rs562099102
Chromosome Location	chr11:23561864-23561865
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832087	chr11:23404474-23569183	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1038101	chr11:23556680-23685548	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:23561000-23562600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr11:23561000-23563200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
3	chr11:23561200-23562200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr11:23561200-23562200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr11:23561400-23562200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr11:23561400-23562200	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr11:23561400-23564000	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr11:23561400-23564000	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr11:23561600-23562200	Enhancers	Adipose Nuclei	Adipose
10	chr11:23561600-23562200	Enhancers	Fetal Muscle Leg	muscle
11	chr11:23561600-23562600	Flanking Active TSS	Dnd41	blood
12	chr11:23561600-23562800	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr11:23561600-23564000	Weak transcription	Fetal Intestine Large	intestine
14	chr11:23561600-23577600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr11:23561800-23562200	Enhancers	Colon Smooth Muscle	Colon
16	chr11:23561800-23562400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr11:23561800-23564000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr11:23561800-23565400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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