Variant report

Variant	rs562128474
Chromosome Location	chr2:95401855-95401856
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv21316	chr2:95326217-95413279	Enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island	4 gene(s)	inside rSNPs	diseases
2	nsv829575	chr2:95327442-95413280	Bivalent Enhancer ZNF genes & repeats Enhancers	TF binding region CpG island	4 gene(s)	inside rSNPs	diseases
3	nsv1006145	chr2:95327875-95413280	Enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island	4 gene(s)	inside rSNPs	diseases
4	nsv1000661	chr2:95327875-95739468	Bivalent Enhancer Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
5	nsv1005016	chr2:95327875-95914467	Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
6	nsv10087	chr2:95340538-95413280	Enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island	4 gene(s)	inside rSNPs	diseases
7	esv2759075	chr2:95358799-95620108	Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
8	nsv963658	chr2:95387376-95413280	Bivalent Enhancer Enhancers ZNF genes & repeats	TF binding region CpG island	4 gene(s)	inside rSNPs	diseases
9	nsv979226	chr2:95401169-95404486	Bivalent Enhancer Enhancers	TF binding region CpG island	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:95401200-95402400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr2:95401400-95402000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links