The 2.0 version of rSNPBase

Variant report

Variant rs56214913
Chromosome Location chr2:55320565-55320566
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55312000-55321200 Weak transcription Lung lung
2 chr2:55315400-55320600 Weak transcription Brain Hippocampus Middle brain
3 chr2:55315400-55320800 Weak transcription Brain Inferior Temporal Lobe brain
4 chr2:55315400-55323600 Weak transcription HSMMtube muscle
5 chr2:55316000-55320600 Weak transcription Brain Substantia Nigra brain
6 chr2:55316000-55322800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr2:55316000-55323800 Weak transcription NHDF-Ad bronchial
8 chr2:55316800-55327200 Enhancers Primary neutrophils fromperipheralblood blood
9 chr2:55317200-55323800 Weak transcription Fetal Muscle Leg muscle
10 chr2:55317400-55322000 Enhancers Primary monocytes fromperipheralblood blood
11 chr2:55318400-55320600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr2:55318400-55323600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr2:55318400-55323600 Weak transcription Hela-S3 cervix
14 chr2:55318400-55329600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr2:55318600-55322800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr2:55319200-55321000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr2:55319400-55321000 Enhancers HMEC breast
18 chr2:55319400-55321600 Enhancers K562 blood
19 chr2:55319400-55321800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:55319400-55321800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr2:55319400-55322200 Enhancers Monocytes-CD14+_RO01746 blood
22 chr2:55319600-55321600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr2:55319600-55322000 Enhancers NHEK skin
24 chr2:55319600-55322200 Enhancers HUVEC blood vessel
25 chr2:55319600-55322400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr2:55319800-55321000 Enhancers Fetal Heart heart
27 chr2:55319800-55321600 Enhancers A549 lung
28 chr2:55319800-55324600 Weak transcription Fetal Intestine Small intestine
29 chr2:55320000-55320800 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr2:55320000-55321000 Enhancers NH-A brain
31 chr2:55320000-55321200 Enhancers NHLF lung
32 chr2:55320000-55321400 Weak transcription Primary hematopoietic stem cells blood
33 chr2:55320000-55321600 Enhancers Osteobl bone
34 chr2:55320000-55327200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr2:55320200-55320600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr2:55320200-55320800 Weak transcription Primary B cells from cord blood blood
37 chr2:55320200-55321000 Enhancers Muscle Satellite Cultured Cells --
38 chr2:55320200-55321600 Enhancers Brain Anterior Caudate brain
39 chr2:55320200-55322000 Enhancers Brain Angular Gyrus brain
40 chr2:55320200-55322000 Enhancers Brain Cingulate Gyrus brain
41 chr2:55320200-55323800 Weak transcription Stomach Mucosa stomach
42 chr2:55320400-55323800 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015