Variant report

Variant	rs562187470
Chromosome Location	chr14:71630506-71630507
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1041980	chr14:71196358-71767339	Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
2	nsv542125	chr14:71196358-71767339	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
3	nsv1038007	chr14:71269747-71667680	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
4	nsv1036929	chr14:71469148-71683412	Strong transcription Genic enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
5	nsv1044090	chr14:71496198-71780026	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
6	esv19757	chr14:71630023-71630732	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71629400-71632800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr14:71629400-71633400	Enhancers	Fetal Intestine Small	intestine
3	chr14:71629400-71633800	Enhancers	Liver	Liver
4	chr14:71629600-71632600	Enhancers	Rectal Mucosa Donor 31	rectum
5	chr14:71629600-71633600	Enhancers	Fetal Intestine Large	intestine
6	chr14:71630000-71630600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr14:71630000-71631200	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr14:71630200-71632200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr14:71630200-71633000	Enhancers	Colonic Mucosa	Colon
10	chr14:71630400-71630600	Bivalent Enhancer	HepG2	liver
11	chr14:71630400-71631800	Weak transcription	Duodenum Mucosa	Duodenum
12	chr14:71630400-71632200	Enhancers	Brain Anterior Caudate	brain
13	chr14:71630400-71633000	Enhancers	Pancreas	Pancrea
14	chr14:71630400-71633200	Enhancers	Sigmoid Colon	Sigmoid Colon
15	chr14:71630400-71633800	Enhancers	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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