Variant report

Variant	rs562190978
Chromosome Location	chr14:81469174-81469175
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv983844	chr14:81467606-81470682	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
3	esv2585992	chr14:81468578-81470083	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Strong transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	n/a
4	nsv1052999	chr14:81468860-81599074	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
5	nsv542144	chr14:81468860-81599074	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
6	esv5863	chr14:81468885-81469630	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	inside rSNPs	n/a
7	esv2036394	chr14:81468925-81469619	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region	1 gene(s)	inside rSNPs	n/a
8	esv3403578	chr14:81468992-81469531	Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region	1 gene(s)	inside rSNPs	n/a
9	esv3528870	chr14:81469025-81469523	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region	1 gene(s)	inside rSNPs	n/a
10	esv3528869	chr14:81469053-81469534	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	inside rSNPs	n/a
11	esv3528872	chr14:81469064-81469484	Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	n/a
12	esv3528871	chr14:81469076-81469474	Bivalent Enhancer Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	n/a
13	esv3363739	chr14:81469093-81469852	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Strong transcription	TF binding region lncRNA	1 gene(s)	inside rSNPs	n/a
14	esv3405725	chr14:81469095-81469501	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	n/a
15	esv3407060	chr14:81469101-81469433	Strong transcription Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region	1 gene(s)	inside rSNPs	n/a
16	esv3407512	chr14:81469114-81469427	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region	1 gene(s)	inside rSNPs	n/a
17	esv3528873	chr14:81469116-81469440	Strong transcription Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81455800-81492200	Weak transcription	Fetal Thymus	thymus
2	chr14:81467000-81470400	Strong transcription	Dnd41	blood
3	chr14:81468000-81486600	Weak transcription	Thymus	Thymus
4	chr14:81468400-81469600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr14:81468400-81472600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr14:81469000-81469200	Bivalent Enhancer	Primary T cells from cord blood	blood
7	chr14:81469000-81469200	Enhancers	Primary hematopoietic stem cells	blood
8	chr14:81469000-81469200	Enhancers	HSMM	muscle
9	chr14:81469000-81469200	Flanking Active TSS	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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