The 2.0 version of rSNPBase

Variant report

Variant rs56219573
Chromosome Location chr12:122764946-122764947
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:122751600-122803400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:122752000-122766400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr12:122752000-122780000 Weak transcription Fetal Kidney kidney
4 chr12:122752000-122800600 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr12:122752000-122802600 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr12:122752200-122766800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr12:122752400-122810400 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr12:122752600-122765200 Weak transcription Hela-S3 cervix
9 chr12:122754600-122822400 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr12:122755400-122765800 Strong transcription Adipose Nuclei Adipose
11 chr12:122755800-122768200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr12:122756000-122766200 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr12:122756200-122766800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
14 chr12:122756600-122766000 Strong transcription Skeletal Muscle Male skeletal muscle
15 chr12:122757200-122766200 Strong transcription Fetal Muscle Trunk muscle
16 chr12:122757600-122780200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr12:122759000-122766600 Weak transcription HMEC breast
18 chr12:122759000-122782200 Weak transcription Right Ventricle heart
19 chr12:122760000-122765200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr12:122760200-122790400 Strong transcription Placenta Placenta
21 chr12:122760400-122766000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr12:122760400-122766200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr12:122760400-122774800 Strong transcription Liver Liver
24 chr12:122760800-122765800 Strong transcription Primary T helper cells fromperipheralblood blood
25 chr12:122760800-122765800 Strong transcription Duodenum Smooth Muscle Duodenum
26 chr12:122760800-122766000 Strong transcription Primary T cells from cord blood blood
27 chr12:122760800-122766000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr12:122761000-122766200 Strong transcription Brain Germinal Matrix brain
29 chr12:122761400-122765800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr12:122761600-122766000 Strong transcription Primary T regulatory cells fromperipheralblood blood
31 chr12:122761600-122766800 Strong transcription Primary monocytes fromperipheralblood blood
32 chr12:122761800-122765400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr12:122761800-122766400 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr12:122762000-122765800 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr12:122762200-122765600 Strong transcription A549 lung
36 chr12:122762200-122765800 Strong transcription Muscle Satellite Cultured Cells --
37 chr12:122762400-122766000 Strong transcription Placenta Amnion Placenta Amnion
38 chr12:122762600-122765400 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr12:122762600-122765600 Strong transcription Primary T helper naive cells fromperipheralblood blood
40 chr12:122762600-122766200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr12:122762800-122765600 Strong transcription NHEK skin
42 chr12:122762800-122766600 Strong transcription Primary T cells fromperipheralblood blood
43 chr12:122762800-122766800 Strong transcription Lung lung
44 chr12:122763400-122765000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr12:122763400-122765400 Weak transcription Rectal Smooth Muscle rectum
46 chr12:122763600-122765000 Weak transcription Esophagus oesophagus
47 chr12:122763600-122765000 Weak transcription Fetal Muscle Leg muscle
48 chr12:122763600-122765000 Weak transcription Stomach Smooth Muscle stomach
49 chr12:122763600-122765000 Weak transcription HSMM muscle
50 chr12:122763600-122765400 Weak transcription Fetal Brain Female brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015