Variant report

Variant rs56222159
Chromosome Location chr9:140112447-140112448
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140100800-140116200 Weak transcription Aorta Aorta
2 chr9:140101200-140113200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr9:140101400-140117200 Weak transcription Fetal Lung lung
4 chr9:140101600-140113200 Weak transcription Right Atrium heart
5 chr9:140101600-140113200 Weak transcription NH-A brain
6 chr9:140101600-140113400 Weak transcription Colon Smooth Muscle Colon
7 chr9:140101600-140116000 Weak transcription Primary hematopoietic stem cells blood
8 chr9:140101800-140113000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr9:140101800-140116000 Weak transcription Primary B cells from cord blood blood
10 chr9:140101800-140116000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr9:140101800-140116000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr9:140101800-140116200 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr9:140101800-140116800 Weak transcription GM12878-XiMat blood
14 chr9:140102000-140113000 Strong transcription Primary hematopoietic stem cells short term culture blood
15 chr9:140102200-140116000 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr9:140103400-140114800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr9:140104200-140116000 Weak transcription Primary B cells from peripheral blood blood
18 chr9:140104200-140116000 Weak transcription Brain Substantia Nigra brain
19 chr9:140104200-140116200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr9:140104800-140113000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr9:140105600-140113400 Strong transcription Dnd41 blood
22 chr9:140107000-140115200 Strong transcription Cortex derived primary cultured neurospheres brain
23 chr9:140107600-140115000 Strong transcription Brain Germinal Matrix brain
24 chr9:140109600-140116000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr9:140110400-140114000 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr9:140110400-140116000 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr9:140110400-140116200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr9:140110600-140112600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr9:140110600-140113600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
30 chr9:140110800-140116000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr9:140110800-140116000 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr9:140110800-140116800 Weak transcription Primary T cells from cord blood blood
33 chr9:140111000-140112800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
34 chr9:140111000-140116000 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr9:140111000-140116000 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr9:140111000-140116000 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr9:140111000-140116000 Weak transcription Brain Angular Gyrus brain
38 chr9:140111000-140116000 Weak transcription Brain Anterior Caudate brain
39 chr9:140111200-140113200 Genic enhancers Spleen Spleen
40 chr9:140111200-140113600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr9:140111200-140115000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr9:140111200-140116000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr9:140111200-140116200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr9:140111400-140112800 Weak transcription Fetal Brain Female brain
45 chr9:140111400-140113000 Active TSS HepG2 liver
46 chr9:140111400-140113800 Flanking Active TSS Duodenum Mucosa Duodenum
47 chr9:140111400-140113800 Enhancers Left Ventricle heart
48 chr9:140111400-140115200 Weak transcription Brain Hippocampus Middle brain
49 chr9:140111400-140115400 Weak transcription Brain Cingulate Gyrus brain
50 chr9:140111400-140116000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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