The 2.0 version of rSNPBase

Variant report

Variant rs56223749
Chromosome Location chr12:64805369-64805370
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:64799200-64805400 Weak transcription Left Ventricle heart
2 chr12:64799200-64805800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr12:64799200-64821200 Weak transcription Stomach Mucosa stomach
4 chr12:64799400-64806400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr12:64799400-64844600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr12:64799600-64806600 Weak transcription Aorta Aorta
7 chr12:64799600-64810400 Weak transcription Colonic Mucosa Colon
8 chr12:64799800-64805800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr12:64799800-64805800 Weak transcription Fetal Stomach stomach
10 chr12:64799800-64805800 Weak transcription Ovary ovary
11 chr12:64799800-64806000 Weak transcription Colon Smooth Muscle Colon
12 chr12:64799800-64806000 Weak transcription Rectal Smooth Muscle rectum
13 chr12:64799800-64806200 Weak transcription Primary B cells from peripheral blood blood
14 chr12:64799800-64806200 Weak transcription Fetal Brain Female brain
15 chr12:64799800-64839600 Weak transcription Fetal Heart heart
16 chr12:64800000-64805400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr12:64800000-64805600 Weak transcription Thymus Thymus
18 chr12:64800000-64805800 Weak transcription Fetal Intestine Small intestine
19 chr12:64800000-64805800 Weak transcription Gastric stomach
20 chr12:64800000-64806000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr12:64800000-64806200 Weak transcription Fetal Lung lung
22 chr12:64800000-64806200 Weak transcription Psoas Muscle Psoas
23 chr12:64800000-64806400 Weak transcription Spleen Spleen
24 chr12:64800200-64805400 Weak transcription Fetal Muscle Trunk muscle
25 chr12:64800200-64806400 Weak transcription Right Ventricle heart
26 chr12:64800200-64819800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr12:64800400-64805400 Weak transcription Esophagus oesophagus
28 chr12:64800600-64806200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr12:64800600-64844000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr12:64800800-64806600 Weak transcription Brain Angular Gyrus brain
31 chr12:64800800-64842400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr12:64801400-64809800 Weak transcription Fetal Brain Male brain
33 chr12:64801600-64805400 Weak transcription Brain Cingulate Gyrus brain
34 chr12:64801600-64818800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr12:64801600-64843600 Strong transcription iPS-20b Cell Line embryonic stem cell
36 chr12:64801800-64805400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr12:64801800-64806000 Weak transcription Pancreas Pancrea
38 chr12:64801800-64806200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr12:64802400-64843000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr12:64802400-64844000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr12:64802600-64817000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr12:64802600-64844000 Strong transcription HUES64 Cell Line embryonic stem cell
43 chr12:64802800-64805800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr12:64802800-64806000 Weak transcription Brain Germinal Matrix brain
45 chr12:64802800-64806400 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr12:64802800-64842800 Strong transcription iPS-18 Cell Line embryonic stem cell
47 chr12:64802800-64843200 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr12:64802800-64843200 Strong transcription Dnd41 blood
49 chr12:64802800-64844000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr12:64803000-64806000 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015