Variant report

Variant	rs562255814
Chromosome Location	chr12:105863313-105863314
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:105861881..105863943-chr12:106421999..106424753,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899501	chr12:105819046-105950801	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv832507	chr12:105821685-106005186	Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1045689	chr12:105836970-105879110	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv899502	chr12:105862964-105904525	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:105858200-105864000	Weak transcription	Fetal Brain Male	brain
2	chr12:105859600-105864000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr12:105860600-105866200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr12:105860800-105863800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr12:105861400-105863600	Enhancers	Fetal Muscle Leg	muscle
6	chr12:105861400-105863600	Enhancers	Placenta	Placenta
7	chr12:105861400-105863800	Enhancers	Left Ventricle	heart
8	chr12:105861400-105864400	Enhancers	HSMMtube	muscle
9	chr12:105862000-105864000	Weak transcription	Fetal Kidney	kidney
10	chr12:105862200-105863600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr12:105862200-105863600	Enhancers	Psoas Muscle	Psoas
12	chr12:105862600-105863800	Enhancers	Lung	lung
13	chr12:105862600-105865000	Enhancers	HSMM	muscle
14	chr12:105862800-105864000	Flanking Active TSS	HUVEC	blood vessel
15	chr12:105862800-105864200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr12:105863000-105863600	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr12:105863000-105863800	Enhancers	Fetal Muscle Trunk	muscle
18	chr12:105863000-105864000	Enhancers	NH-A	brain
19	chr12:105863000-105864200	Enhancers	Muscle Satellite Cultured Cells	--
20	chr12:105863000-105864200	Enhancers	Aorta	Aorta
21	chr12:105863200-105863400	Enhancers	Fetal Heart	heart
22	chr12:105863200-105864000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr12:105863200-105864000	Weak transcription	Right Ventricle	heart
24	chr12:105863200-105884200	Weak transcription	Right Atrium	heart

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