Variant report

Variant	rs562268108
Chromosome Location	chr6:114066147-114066148
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021774	chr6:114063971-114407280	Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
2	nsv538422	chr6:114063971-114407280	Genic enhancers Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
3	esv3397816	chr6:114064184-114066207	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
4	esv3389685	chr6:114065159-114066207	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:114064200-114066200	Weak transcription	Fetal Heart	heart
2	chr6:114065000-114067800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr6:114065800-114066400	Enhancers	Pancreatic Islets	Pancreatic Islet
4	chr6:114065800-114066400	Enhancers	Fetal Lung	lung
5	chr6:114065800-114066400	Enhancers	Fetal Muscle Leg	muscle
6	chr6:114065800-114066400	Enhancers	Placenta	Placenta
7	chr6:114065800-114066400	Enhancers	HepG2	liver
8	chr6:114065800-114066800	Enhancers	Adipose Nuclei	Adipose
9	chr6:114065800-114067200	Enhancers	Psoas Muscle	Psoas
10	chr6:114065800-114067200	Enhancers	Skeletal Muscle Female	skeletal muscle
11	chr6:114066000-114066400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr6:114066000-114066600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr6:114066000-114066800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr6:114066000-114067000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr6:114066000-114067200	Enhancers	Colon Smooth Muscle	Colon
16	chr6:114066000-114067200	Enhancers	Skeletal Muscle Male	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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