Variant report

Variant	rs562273834
Chromosome Location	chr4:91502576-91502577
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931074	chr4:90970476-91753697	Enhancers Strong transcription Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv999065	chr4:91049593-91520073	Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	esv1830936	chr4:91287204-91546380	Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv534470	chr4:91342219-91842807	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv879543	chr4:91428124-91524285	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	esv3406510	chr4:91500970-91508516	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3394548	chr4:91500980-91508514	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:91501400-91503800	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr4:91501600-91504000	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr4:91501800-91502800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr4:91501800-91503000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr4:91501800-91503400	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr4:91502000-91503000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr4:91502000-91503200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr4:91502000-91505200	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr4:91502200-91502600	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr4:91502400-91502800	Weak transcription	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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