Variant report

Variant rs562280820
Chromosome Location chr6:31947706-31947707
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31941000-31949600 Weak transcription Right Ventricle heart
2 chr6:31941000-31949800 Weak transcription Gastric stomach
3 chr6:31941200-31949200 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr6:31941200-31949400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr6:31941200-31949400 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr6:31941200-31950000 Weak transcription Rectal Smooth Muscle rectum
7 chr6:31941400-31949000 Weak transcription Colonic Mucosa Colon
8 chr6:31941400-31949400 Weak transcription Primary B cells from cord blood blood
9 chr6:31941400-31949400 Weak transcription NH-A brain
10 chr6:31941400-31950000 Weak transcription Fetal Kidney kidney
11 chr6:31941600-31947800 Weak transcription Fetal Lung lung
12 chr6:31941600-31948000 Weak transcription Hela-S3 cervix
13 chr6:31941600-31949200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr6:31941600-31949200 Weak transcription Colon Smooth Muscle Colon
15 chr6:31941600-31950000 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr6:31941800-31948600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr6:31941800-31950000 Weak transcription Dnd41 blood
18 chr6:31944800-31948400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr6:31945400-31948400 Strong transcription Fetal Muscle Leg muscle
20 chr6:31945800-31947800 Enhancers Primary T cells from cord blood blood
21 chr6:31945800-31947800 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr6:31945800-31948400 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr6:31945800-31948400 Strong transcription Fetal Brain Female brain
24 chr6:31946000-31947800 Enhancers Primary T helper naive cells from peripheral blood blood
25 chr6:31946000-31947800 Enhancers Primary T helper cells PMA-I stimulated --
26 chr6:31946000-31948200 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr6:31946000-31948200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr6:31946400-31948200 Strong transcription Placenta Placenta
29 chr6:31946400-31948400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr6:31946400-31948400 Strong transcription Brain Germinal Matrix brain
31 chr6:31946400-31948400 Strong transcription Brain Hippocampus Middle brain
32 chr6:31946400-31948400 Strong transcription Duodenum Smooth Muscle Duodenum
33 chr6:31946400-31948400 Strong transcription Rectal Mucosa Donor 29 rectum
34 chr6:31946600-31947800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr6:31946600-31948200 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr6:31946600-31948200 Strong transcription Cortex derived primary cultured neurospheres brain
37 chr6:31946600-31948400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr6:31946600-31948400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr6:31946600-31948400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr6:31946600-31948400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr6:31946600-31948400 Strong transcription Primary monocytes fromperipheralblood blood
42 chr6:31946600-31948400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr6:31946600-31948400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:31946600-31948400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr6:31946600-31948400 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr6:31946600-31948400 Strong transcription Fetal Intestine Large intestine
47 chr6:31946600-31948400 Strong transcription Left Ventricle heart
48 chr6:31946600-31948400 Strong transcription Lung lung
49 chr6:31946600-31948400 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr6:31946600-31948600 Strong transcription Fetal Intestine Small intestine

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