Variant report

Variant	rs562364199
Chromosome Location	chr6:100733602-100733603
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030316	chr6:100733205-100759678	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:100730400-100741600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:100731000-100734600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr6:100731600-100744200	Weak transcription	NHDF-Ad	bronchial
4	chr6:100731800-100733800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:100732000-100736000	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr6:100732000-100736600	Weak transcription	HUVEC	blood vessel
7	chr6:100732000-100744200	Weak transcription	NHLF	lung
8	chr6:100732400-100736000	Weak transcription	A549	lung
9	chr6:100732600-100734400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr6:100733000-100736000	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr6:100733600-100734200	Enhancers	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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